CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc14509
(
Meloidogyne incognita
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Minc14509
T197170_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc14509a
GATA
320
356
CHHCFSSKSVDWHHAGHDRLLLMCTECRIFYKRYGQL
Minc14509b
GATA
266
302
CHHCFSSKSVDWHHAGHDRLLLMCTECRIFYKRYGQL
Minc14509c
GATA
175
211
CHHCFSSKSVDWHHAGHDRLLLMCTECRIFYKRYGQL
Links
Other
GATA
family TFs
Other
Meloidogyne incognita
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
snap_masked-nMf.1.1.scaf15758-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf15758-processed-gene-0.2
N
0.867