CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g05824
(
Litomosoides sigmodontis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
nLs.2.1.2.g05824
T197705_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t05824-RA
GATA
519
556
CESCQVDESTQWYAWGPAHLQLRLCSICWSQWKKYGGL
Links
Other
GATA
family TFs
Other
Litomosoides sigmodontis
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WBGene00249034
Onchocerca volvulus
WBGene00249034
N
1.000
nDi.2.2.2.g07220
Dirofilaria immitis
nDi.2.2.2.g07220
N
1.000
nOo.2.0.1.g01527
Onchocerca ochengi
nOo.2.0.1.g01527
N
1.000
LOAG_18231
Loa loa
LOAG_18231
N
0.988
nAv.1.0.1.g07054
Acanthocheilonema viteae
nAv.1.0.1.g07054
N
0.988
OFLC_0001456001
Onchocerca flexuosa
OFLC_0001456001
N
0.988
WUBG_00082
Wuchereria bancrofti
WUBG_00082
N
0.963
Bm6042
Brugia malayi
Bm6042
N
0.963
BTMF_0000210501
Brugia timori
BTMF_0000210501
N
0.963
TCLT_0000698201
Thelazia callipaeda
TCLT_0000698201
N
0.915
GPUH_0001020201
Gongylonema pulchrum
GPUH_0001020201
N
0.864
DME_0000980101
Dracunculus medinensis
DME_0000980101
N
0.840
TCNE_0001907801
Toxocara canis
TCNE_0001907801
N
0.805
ASU_04577
Ascaris suum
ASU_04577
N
0.793
HPLM_0001560201
Haemonchus placei
HPLM_0001560201
N
0.761
GPLIN_000089000
Globodera pallida
GPLIN_000089000
N
0.756
scaffold26-EXSNAP2012.56
Pristionchus exspectatus
scaffold26-EXSNAP2012.56
N
0.744
TELCIR_06695
Teladorsagia circumcincta
TELCIR_06695
N
0.741
NV14853
Nasonia vitripennis
NV14853
N
0.732
EVEC_0001015201
Enterobius vermicularis
EVEC_0001015201
N
0.732
SMUV_0000864901
Syphacia muris
SMUV_0000864901
N
0.732
ANCDUO_01695
Ancylostoma duodenale
ANCDUO_01695
N
0.728
HCOI00708300
Haemonchus contortus
HCOI00708300
N
0.728
NBR_0001426901
Nippostrongylus brasiliensis
NBR_0001426901
N
0.728
SVUK_0000622201
Strongylus vulgaris
SVUK_0000622201
N
0.728
SMAR013016
Strigamia maritima
SMAR013016
N
0.720
BGLB005972
Biomphalaria glabrata
BGLB005972
N
0.720
ANCCAN_04914
Ancylostoma caninum
ANCCAN_04914
N
0.720
ANCCEY_13862
Ancylostoma ceylanicum
ANCCEY_13862
N
0.720
GB44679
Apis mellifera
GB44679
N
0.707
HelroG187398
Helobdella robusta
HelroG187398
N
0.707
KGM_11481
Danaus plexippus
KGM_11481
N
0.707
LotgiG180212
Lottia gigantea
LotgiG180212
N
0.707
TC008832
Tribolium castaneum
TC008832
N
0.707
ISCW003309
Ixodes scapularis
ISCW003309
N
0.705
EFV54708
Trichinella spiralis
EFV54708
N
0.704
D917_06199
Trichinella nativa
D917_06199
N
0.704
MhA1_Contig309.frz3.gene13
Meloidogyne hapla
MhA1_Contig309.frz3.gene13
N
0.704