CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPAPADRAFT_57752
(
Spathaspora passalidarum
)
GCR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF12550 (GCR1_C)
IPR022210
SPAPADRAFT_57752
T198634_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CaO19.3328
M02029_2.00
Candida albicans
NNNYGTCBBN
NVVGACRNNN
PBM
Weirauch et al.(2014)
pTH8736
0.769
0.769
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGW34695
GCR1
134
211
YRLERSLKSISDIWKEYEYGLNDKPPLKLLEIKYGTKWRNDTESRTFLRRKKIYDAIENGKAKGYTEDQVIRELEEYR
Links
Other
GCR1
family TFs
Other
Spathaspora passalidarum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CPAG_00882
Candida parapsilosis
CPAG_00882
I
0.808
CTRG_04439
Candida tropicalis
CTRG_04439
I
0.808
CORT_0B10260
Candida orthopsilosis
CORT_0B10260
I
0.795
LELG_01413
Lodderomyces elongisporus
LELG_01413
I
0.795
CaO19.10838
Candida albicans
CaO19.10838
I
0.769
CaO19.3328
Candida albicans
CaO19.3328
D
0.769
CD36_01290
Candida dubliniensis
CD36_01290
I
0.769
G210_3119
Candida maltosa
G210_3119
I
0.731