CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L898_g1752
(
Steinernema monticolum
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
L898_g1752
T199710_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L898_g1752.t1
Grainyhead
197
416
QEMTSVIERPERTLSHRDSPVVIAKIHNRLGFQYVLEAPISTSIRKDDDRMTYVNKGQYYNVIMSYIPDHSKPLQSKTVRSTLLLAFREDKTYEKEMETWCKWHKEQQNRRQRIIDYDLKNSQGIIGQITEVSLNAIEFYWDPTEGPVKLSVAVQCLSTDFSPQKGVKGWPMHLQIDTFDDENAKIPFHRGFCQIKVFCDKGAERKLRDEDKRAQKRKNQ
L898_g1752.t2
Grainyhead
133
353
PQEMTSVIERPERTLSHRDSPVVIAKIHNRLGFQYVLEAPISTSIRKDDDRMTYVNKGQYYNVIMSYIPDHSKPLQSKTVRSTLLLAFREDKTYEKEMETWCKWHKEQQNRRQRIIDYDLKNSQGIIGQITEVSLNAIEFYWDPTEGPVKLSVAVQCLSTDFSPQKGVKGWPMHLQIDTFDDENAKIPFHRGFCQIKVFCDKGAERKLRDEDKRAQKRKNQ
Links
Other
Grainyhead
family TFs
Other
Steinernema monticolum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g19549
Steinernema carpocapsae
L596_g19549
N
0.869
L893_g6531
Steinernema glaseri
L893_g6531
N
0.857
L889_g11263
Steinernema feltiae
L889_g11263
N
0.827
L892_g25006
Steinernema scapterisci
L892_g25006
N
0.810
MhA1_Contig3342.frz3.fgene1
Meloidogyne hapla
MhA1_Contig3342.frz3.fgene1
I
0.722