CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo1g005470
(
Brassica oleracea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bo1g005470
T199914_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo1g005470.1
GRAS
121
488
FVEDLIRVVDCVESDELQLAQVILSRLNQRLRSPAGRPLQRAAFYFKEALGSLLTGSNRNQTRLLSSWTEIVQKIRAVKEFSGISPIPLFSHFTANQAILDSLSSQQSSSSPFVHVVDFDIGFGGQYASLMREIAEKSISSGFLRVTAVVAEECAVETRLVKENLTQFAAEMKIRFQIEFVLMKTFEMLSFKAIRFVDGERTVVLISPAIFRRLSGIAEFVTNLRRVFPKVVVFVDSEGWTEIAGAGSFRREFVTALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKIAAAVETTAGGRRNVGEMTWREAFCGAGMRSIQLSQFAIFQAECLLEKAQVRGFHVAKRQEELVLCWHGRALVATSAWR
Links
Other
GRAS
family TFs
Other
Brassica oleracea
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra011700
Brassica rapa
Bra011700
N
0.958
Cagra.5996s0001
Capsella grandiflora
Cagra.5996s0001
N
0.888
Carubv10004700m.g
Capsella rubella
Carubv10004700m.g
N
0.885
Bostr.7867s1527
Boechera stricta
Bostr.7867s1527
N
0.883
Thhalv10025054m.g
Eutrema salsugineum
Thhalv10025054m.g
N
0.880
SCL15
Arabidopsis thaliana
AT4G36710
N
0.875
fgenesh2_kg.7__396__AT4G36710.1
Arabidopsis lyrata
fgenesh2_kg.7__396__AT4G36710.1
N
0.874
Bo7g118110
Brassica oleracea
Bo7g118110
N
0.819
Thhalv10023133m.g
Eutrema salsugineum
Thhalv10023133m.g
N
0.818
Bra028100
Brassica rapa
Bra028100
N
0.788
Bo7g009980
Brassica oleracea
Bo7g009980
N
0.786
Bostr.18351s0321
Boechera stricta
Bostr.18351s0321
N
0.783
Carubv10013509m.g
Capsella rubella
Carubv10013509m.g
N
0.772
Bra017775
Brassica rapa
Bra017775
N
0.754