CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GLYMA16G25570
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA16G25570
T200239_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA16G25570.1
GRAS
173
539
FIEELIRAADCFDSSHFQLAQAILERLNNRLLRSPMGKPLHRAAFHFKDALQSILAGSNRTSSNRLSSMAEIVQTIKTYKAFSGISPIPMFSVFTTNQALLETLNGSSFVHVIDFEIGLGIQYASLMKEIAEKAGAGASPLLRITAVVPEEYAVESRLVRENLNQFAQDLGISAQVDFVPLRTFETVSFKAVRFVDGEKIAVLLSPAIFSRLGSNGGSVGAFLADVRRVSPGVVVFVDGEGWTEAAAAASFRRGVVSSLEFYSMMLESLDASVAAGGGGEWVRRIEMMLLRPKIFAAVEGARRRTPPWREAFYDAAMRPVQLSQFADYQAECLLAKVQIRGFHVDKRHAELVLCWHERVMVATSAWR
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA02G06530
Glycine max
GLYMA02G06530
N
0.908
chr4.CM0165.310.nd
Lotus japonicus
chr4.CM0165.310.nd
N
0.836
MTR_8g077940
Medicago truncatula
MTR_8g077940
N
0.829
Ca_16043
Cicer arietinum
Ca_16043
N
0.829
LjSGA_023918.1
Lotus japonicus
LjSGA_023918.1
N
0.768
GLYMA01G38360
Glycine max
GLYMA01G38360
N
0.744
GLYMA11G06980
Glycine max
GLYMA11G06980
N
0.724
gene29558-v1.0-hybrid
Fragaria vesca
gene29558-v1.0-hybrid
N
0.706