CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OGLUM11G22870
(
Oryza glumaepatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OGLUM11G22870
T200735_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM11G22870.1
GRAS
262
303
LHTLLIHCAQAVATGDWRSATELLKQIKQNSMANPEDFFWEA
OGLUM11G22870.1
GRAS
505
876
LRLLLIQCAQATATDNQQSAGELLKKIKQHTLATGDAMQRVAHYFAKGLEARLAGRGKHLYQNQMRMSLVEYLKVYKLYMAACCFTKVALMFAAMTIMQAVQGKKRLHIVDYGPRCGLHWPDLLRRLGSREDGPPEVRITIVDILQPAFRPFQRIEEAGHCLSSCANEFRVPFRFQAVAAAKWETVGAEDLHIEPDEVLVVNDLLSFSALMDESVFCDGPNPRDVALRNISKMQPDVFIQGITNDNYGASFLSRFRAVLLYYSALFDILDATTPRDSGLRLALEQNLLGPYALNAIACEGADLVERPEKYKQWQARNHRAGMQQLKLRPDIVDTIRDEVNKYHHKDFLLGEDGQWLLQGWMGRILFAHSAWV
Links
Other
GRAS
family TFs
Other
Oryza glumaepatula
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA035745
Oryza indica
BGIOSGA035745
N
0.892
ORGLA11G0190600
Oryza glaberrima
ORGLA11G0190600
N
0.892
ORUFI11G25590
Oryza rufipogon
ORUFI11G25590
N
0.892
OS11G0706200
Oryza sativa
OS11G0706200
N
0.892
OLONG_005032
Oryza longistaminata
OLONG_005032
N
0.848
ORGLA11G0190500
Oryza glaberrima
ORGLA11G0190500
N
0.841
ORUFI11G25580
Oryza rufipogon
ORUFI11G25580
N
0.838
BGIOSGA035744
Oryza indica
BGIOSGA035744
N
0.836
OPUNC11G20020
Oryza punctata
OPUNC11G20020
N
0.804
ONIVA11G23210
Oryza nivara
ONIVA11G23210
N
0.787