CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA06G0172100
(
Oryza glaberrima
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ORGLA06G0172100
T200965_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA06G0172100.1
GRAS
114
498
TRDLLLACADLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDAKAGHGHVVVGGGAARPASSGAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWPPLLQAIAERADPALGPPEVRVTGAGADRDTLLRTGNRLRAFARSIHLPFHFTPLLLSCATTAPHHVAGTSTDAAATASTAAAATGLEFHPDETLAVNCVMFLHNLAGHDELAAFLKWVKAMSPAVVTIAEREAGGGGDHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGGRWWRGIERWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAWQ
Links
Other
GRAS
family TFs
Other
Oryza glaberrima
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA06G24530
Oryza nivara
ONIVA06G24530
N
0.994
BGIOSGA023255
Oryza indica
BGIOSGA023255
N
0.992
ORUFI06G22200
Oryza rufipogon
ORUFI06G22200
N
0.992
OMERI06G21310
Oryza meridionalis
OMERI06G21310
N
0.989
OPUNC06G18940
Oryza punctata
OPUNC06G18940
N
0.874
Si008068m.g
Setaria italica
Si008068m.g
N
0.852
GRMZM2G114680
Zea mays
GRMZM2G114680
N
0.844
Pavir.Da00564
Panicum virgatum
Pavir.Da00564
N
0.838
Sb10g023950
Sorghum bicolor
Sb10g023950
N
0.821
OGLUM06G21860
Oryza glumaepatula
OGLUM06G21860
N
0.774
BRADI1G36180
Brachypodium distachyon
BRADI1G36180
N
0.768
LPERR06G17370
Leersia perrieri
LPERR06G17370
N
0.702