CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Si001436m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si001436m.g
T201487_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si001436m
GRAS
1
357
MQRVAAAFAEALARRALRAWPGLCRALLLPRAAPAAAELAAARRHFLDLCPFLRIAGAAANQCILEAMESEKIVHVIDLGGADATQWLELLHLLAARPEGPPHLRLTAVHEHKDVLAQTAMALTKEAERLDVPFQFNPVVCRLDALDVESLRVKTGEALAITSSLQLHCLLASDDDSAAGAGKDNNSSNKTERRSPESGLSPSTSRADAFLGALWGLSPKLMVLTEQEASHNAAALTERFVEALNYYAALFDCLEVVAARGSVERARVERWLLGEEIKNIVACDGVERRERHERLDRWAARMEGAGFGRVPMSYYALLQARRAAQGLGCDGFKVREEKGSFFLCWQDRAIFSVSAWR
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA005161
Oryza indica
BGIOSGA005161
N
0.924
OGLUM01G48120
Oryza glumaepatula
OGLUM01G48120
N
0.924
ONIVA01G49810
Oryza nivara
ONIVA01G49810
N
0.924
ORGLA01G0376700
Oryza glaberrima
ORGLA01G0376700
N
0.924
OS01G0948200
Oryza sativa
OS01G0948200
N
0.924
Sb03g045660
Sorghum bicolor
Sb03g045660
N
0.891
GRMZM2G129154
Zea mays
GRMZM2G129154
N
0.861
LPERR01G38150
Leersia perrieri
LPERR01G38150
N
0.861
BRADI2G60750
Brachypodium distachyon
BRADI2G60750
N
0.843
OB01G54660
Oryza brachyantha
OB01G54660
N
0.825
GRMZM2G082387
Zea mays
GRMZM2G082387
N
0.793
ORUFI06G07300
Oryza rufipogon
ORUFI06G07300
N
0.756
OPUNC01G42770
Oryza punctata
OPUNC01G42770
N
0.743
OGLUM03G40270
Oryza glumaepatula
OGLUM03G40270
N
0.719