CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LAS
(
Vitis vinifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
VIT_19s0015g01930
T201853_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_19s0015g01930.t01
GRAS
36
413
MRQLLISCAELVSQSDFSAARRLLSILSSNSSPFGDSTERLVHQFSAALSLRLSRYATPATSSGAMSASANTAAADSEAFHSTYLSLNQITPFIRFSQLTANQAILEAIEGQRAIHILDFDIMHGVQWPPLMQAIAERCGNLHPPPMIRITGTGEDLGILQRTGDRLLKFAQSLGLKFQFHPLLLRNDPTSVPLYLPSALQLLPDETLAVNCVLYLHRLLKDDSRDLRLFLHKIKAMEPKVVTIAEREANHNHPLFLQRFVEALDHYTAVFDSLEATLPPTSRERLAVERIWFGREIVDIVSAEGDNRRERHERFESWEVMLRSSGFSNVPLSPFALSQAKLLLRLHYPSEGYRLQIINDSFFLGWQNQALFSVSSWH
Links
Other
GRAS
family TFs
Other
Vitis vinifera
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_030498
Theobroma cacao
TCM_030498
N
0.782
cassava3084.m1
Manihot esculenta
cassava3084.m1
N
0.779
cassava4025.m1
Manihot esculenta
cassava4025.m1
N
0.760
POPTR_0015s01070
Populus trichocarpa
POPTR_0015s01070
N
0.751
SapurV1A.1366s0020
Salix purpurea
SapurV1A.1366s0020
N
0.750
POPTR_0001s47720
Populus trichocarpa
POPTR_0001s47720
N
0.748
SapurV1A.1574s0010
Salix purpurea
SapurV1A.1574s0010
N
0.747
POPTR_0012s02710
Populus trichocarpa
POPTR_0012s02710
N
0.744
Gorai.004G034900
Gossypium raimondii
Gorai.004G034900
N
0.738
SapurV1A.0250s0110
Salix purpurea
SapurV1A.0250s0110
N
0.725
Ciclev10008226m.g
Citrus clementina
Ciclev10008226m.g
N
0.723
orange1.1g048299m.g
Citrus sinensis
orange1.1g048299m.g
N
0.723
PGSC0003DMG400022244
Solanum tuberosum
PGSC0003DMG400022244
N
0.718
Solyc07g066250.1
Solanum lycopersicum
Solyc07g066250.1
N
0.711
Eucgr.F01978
Eucalyptus grandis
Eucgr.F01978
N
0.706
PRUPE_ppa025834mg
Prunus persica
PRUPE_ppa025834mg
N
0.700
Pm000313
Prunus mume
Pm000313
N
0.700