CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J07013
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J07013
T203045_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J07013.1.p
GRAS
1
182
MLHVKRGERVAVNCVLAAHRLLRDDTGAALADFLGLARSTGAAILLLGEHEDALNSGGWEARFARALRFYAAAFDAVDAAGLPDASPARVKAEEMFAREICNAVAFEDADRFERHESFAGWRRRMEEGGFQNAGLGDREVMQARMIARMFAPGNYSVQAQGNGEGLTLRWLDQPMYTVSAWA
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J20271
Panicum virgatum
Pavir.J20271
N
0.961
AC234164.1_FG004
Zea mays
AC234164.1_FG004
N
0.848
Traes_4AL_7B4A599EC
Triticum aestivum
Traes_4AL_7B4A599EC
N
0.836
ORGLA06G0016600
Oryza glaberrima
ORGLA06G0016600
N
0.798
AC200124.3_FG005
Zea mays
AC200124.3_FG005
N
0.782