CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.J27104
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J27104
T203079_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J27104.1.p
GRAS
1
286
MESEKMVHVVDLGGADATQWLELLHLLAARPEGPPHLRLTAVHEHKDVLTQTAMVLAKEAERLDVPFQFNPVVCRLEALDVESLRVKTGEALAVTSSLQLHCLLASDDDSNGSKDSSSNDKGERRVKHRSSPESGSGVSPSTSRADAFLGALWGLSPKVMVVTEQEASHNAAALTERFVEALNYYAALFDCLEVVAARGSVERARVERWLLGEEIKNIVACEGGERRERHERLERWAARMEGAGFARVPLSYYALLQARRAAQGLCCDGFKDRAIFSVSAWRGRRL
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G129154
Zea mays
GRMZM2G129154
N
0.843
OPUNC01G42770
Oryza punctata
OPUNC01G42770
N
0.839
OB01G54660
Oryza brachyantha
OB01G54660
N
0.838
OBART06G07100
Oryza barthii
OBART06G07100
N
0.806
BRADI2G60750
Brachypodium distachyon
BRADI2G60750
N
0.799
OS06G0211500
Oryza sativa
OS06G0211500
N
0.756