CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10006948m.g
(
Eutrema salsugineum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Thhalv10006948m.g
T203194_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10006948m
GRAS
331
709
FRTLLTLCAQSISAGDKITADDLLRQIRKQCSPLGDASQRLAYFFANALEVRLQGSTGTMIQSYYDSITSKKRTAAQILKSYKVFLSASPFMTLIYFFSNKMILDAAKDASVLHIIDFGILYGFQWPMFIQNISKSKTGPRKLRITGIELPQNGFRPTERIEDTGRRLTEYCKRFGVPFEYNAIASKNWETIRMEQFKIRPNEVLAVNTVLRFKNLRDVTPGEEDCPRDAFLKLIRDMNPDVFLSSTVNGSFNAPFFTTRFKEALFHYSSLFDMFGSTLSRENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMMRAGFKQKPVEAELVESFREKMNKWGYHKDFVLDQDCNWFLQGWKGRILFSSSCWL
Links
Other
GRAS
family TFs
Other
Eutrema salsugineum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.25219s0208
Boechera stricta
Bostr.25219s0208
N
0.914
AT1G07520
Arabidopsis thaliana
AT1G07520
N
0.912
Bo5g008260
Brassica oleracea
Bo5g008260
N
0.901
Cagra.1671s0372
Capsella grandiflora
Cagra.1671s0372
N
0.901
Carubv10010943m.g
Capsella rubella
Carubv10010943m.g
N
0.901
Bo8g114030
Brassica oleracea
Bo8g114030
N
0.890
Bra031580
Brassica rapa
Bra031580
N
0.888
Bra031581
Brassica rapa
Bra031581
N
0.874
Bo8g114020
Brassica oleracea
Bo8g114020
N
0.865
Thhalv10016365m.g
Eutrema salsugineum
Thhalv10016365m.g
N
0.746
Bostr.27991s0168
Boechera stricta
Bostr.27991s0168
N
0.733
SCL34
Arabidopsis thaliana
AT2G29065
N
0.719
Bra028391
Brassica rapa
Bra028391
N
0.719
Bo4g065830
Brassica oleracea
Bo4g065830
N
0.717
Cagra.3264s0007
Capsella grandiflora
Cagra.3264s0007
N
0.709
Carubv10022816m.g
Capsella rubella
Carubv10022816m.g
N
0.709