CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr4.CM0680.80.nc
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
chr4.CM0680.80.nc
T203284_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr4.CM0680.80.nc
GRAS
135
500
LVDLLLTAAEAVEAQNWYLASEIIEKLTNDASSLQNGDSLLNRLALFFAQGLFDKSSSPTPKLQYYCDPVSTQTDTFCVLQILQELSPYVKFAHFTANQAILEATDGVEDVHIIDFDIMEGIQWPPLMVDLAMRKSTSTTSLRVTAITVDQQSAASAHQTGRRLEEFAASINFPFTFNQVMMVSEEDLQRIELGHSLIVNCMIHQWMPNRSFSLVKTFLDGVTKLSPKLVVLVEEELFNFSKLKSMSFVEFFCEALHHYTAISDSLASGMWGSHKVEFALIEKQVLGLRILDSVRQFPCEREERMLWEEGLFSLKGFKRVGVSSSNISQAKFLVSLFGKGYWVQFEKCRLALCWKSRPLTVASIWV
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA08G15530
Glycine max
GLYMA08G15530
N
0.754
Ca_09655
Cicer arietinum
Ca_09655
N
0.744
MTR_8g093070
Medicago truncatula
MTR_8g093070
N
0.722