CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjSGA_045015.1
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
LjSGA_045015.1
T203308_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_045015.1
GRAS
6
205
LSNESNTFHFESLLSLLNPSVLNLREDEALVINCQNWLRYLSDDDRNSNSLRDAFLSLIKGLSPQIVLLVDEDCDLSASSLASRITACFNHLWIPFDALDTFLPKDSSQRTEFESDIGQKLINIIGFEGHQRIERLESGVMMSQRMKNAGYFSVPFCDETVKEVKGLLDEHAGGWGMKRDEGMLVLTWKGNNCVFVTAWV
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_2g089100
Medicago truncatula
MTR_2g089100
N
0.824
GLYMA13G38080
Glycine max
GLYMA13G38080
N
0.814
Ca_14137
Cicer arietinum
Ca_14137
N
0.804
Ca_27895
Cicer arietinum
Ca_27895
N
0.804
GLYMA12G32350
Glycine max
GLYMA12G32350
N
0.789
cassava21819.m1
Manihot esculenta
cassava21819.m1
N
0.709