Bra021363 (Brassica rapa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Bra021363 T205121_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra021363.1-P Homeodomain 23 79

Links

Other Homeodomain family TFs
Other Brassica rapa TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_11891 Cicer arietinum Ca_11891 I 0.737
GLYMA01G45070 Glycine max GLYMA01G45070 I 0.736
GLYMA11G00570 Glycine max GLYMA11G00570 I 0.736
Bo1g154790 Brassica oleracea Bo1g154790 I 0.728
GLYMA09G02990 Glycine max GLYMA09G02990 N 0.711
MTR_5g005600 Medicago truncatula MTR_5g005600 N 0.676
Bra028295 Brassica rapa Bra028295 I 0.674
Bo9g104880 Brassica oleracea Bo9g104880 I 0.674
SELMODRAFT_450564 Selaginella moellendorffii SELMODRAFT_450564 I 0.625
SELMODRAFT_234698 Selaginella moellendorffii SELMODRAFT_234698 I 0.625
Eucgr.F02903 Eucalyptus grandis Eucgr.F02903 I 0.624
Ca_04629 Cicer arietinum Ca_04629 I 0.619
Carubv10002574m.g Capsella rubella Carubv10002574m.g I 0.615
Cagra.4849s0002 Capsella grandiflora Cagra.4849s0002 I 0.615
Cucsa.148430 Cucumis sativus Cucsa.148430 I 0.605
cassava6464.valid.m1 Manihot esculenta cassava6464.valid.m1 I 0.605
Cla007796 Citrullus lanatus Cla007796 I 0.605
Gorai.013G100200 Gossypium raimondii Gorai.013G100200 I 0.605
Gorai.005G150100 Gossypium raimondii Gorai.005G150100 I 0.605
29600.m000538 Ricinus communis 29600.m000538 I 0.603
Ca_07131 Cicer arietinum Ca_07131 I 0.603
LjSGA_029418.1 Lotus japonicus LjSGA_029418.1 I 0.603
Pm015192 Prunus mume Pm015192 I 0.603
cassava12566.valid.m1 Manihot esculenta cassava12566.valid.m1 I 0.603
Aquca_047_00083 Aquilegia coerulea Aquca_047_00083 I 0.603
evm.TU.supercontig_8.223 Carica papaya evm.TU.supercontig_8.223 I 0.603
Pavir.J39995 Panicum virgatum Pavir.J39995 I 0.603
LjSGA_004176.2 Lotus japonicus LjSGA_004176.2 I 0.603
SapurV1A.0402s0050 Salix purpurea SapurV1A.0402s0050 I 0.603
SapurV1A.1440s0010 Salix purpurea SapurV1A.1440s0010 I 0.603
PK16243.1 Cannabis sativa PK16243.1 I 0.603
Pavir.Fb00210 Panicum virgatum Pavir.Fb00210 I 0.603
orange1.1g004294m.g Citrus sinensis orange1.1g004294m.g I 0.603
Lus10027175.g Linum usitatissimum Lus10027175.g I 0.603
HDG2 Vitis vinifera VIT_12s0059g02310 I 0.603
Lus10039667.g Linum usitatissimum Lus10039667.g I 0.603
MDP0000318514 Malus domestica MDP0000318514 I 0.603
MDP0000389745 Malus domestica MDP0000389745 I 0.603
Ciclev10014373m.g Citrus clementina Ciclev10014373m.g I 0.603
Sb07g002780 Sorghum bicolor Sb07g002780 I 0.603
MTR_2g088470 Medicago truncatula MTR_2g088470 I 0.603
LPERR08G02370 Leersia perrieri LPERR08G02370 I 0.603
OB08G12470 Oryza brachyantha OB08G12470 I 0.603
TCM_011330 Theobroma cacao TCM_011330 I 0.603
OGLUM08G02240 Oryza glumaepatula OGLUM08G02240 I 0.603
GRMZM2G004957 Zea mays GRMZM2G004957 I 0.603
GLYMA13G38430 Glycine max GLYMA13G38430 I 0.603
BGIOSGA027698 Oryza indica BGIOSGA027698 I 0.603
GLYMA06G46000 Glycine max GLYMA06G46000 I 0.603
GLYMA12G10710 Glycine max GLYMA12G10710 I 0.603
GLYMA12G32050 Glycine max GLYMA12G32050 I 0.603
OLONG_001685 Oryza longistaminata OLONG_001685 I 0.603
OBART08G02270 Oryza barthii OBART08G02270 I 0.603
POPTR_0014s15010 Populus trichocarpa POPTR_0014s15010 I 0.603
OMERI08G02310 Oryza meridionalis OMERI08G02310 I 0.603
PRUPE_ppa019198mg Prunus persica PRUPE_ppa019198mg I 0.603
AMTR_s00004p00265170 Amborella trichopoda AMTR_s00004p00265170 I 0.603
Si013279m.g Setaria italica Si013279m.g I 0.603
OS08G0136100 Oryza sativa OS08G0136100 I 0.603
POPTR_0002s23080 Populus trichocarpa POPTR_0002s23080 I 0.603
ONIVA08G02450 Oryza nivara ONIVA08G02450 I 0.603
OPUNC08G02090 Oryza punctata OPUNC08G02090 I 0.603
ORGLA08G0016400 Oryza glaberrima ORGLA08G0016400 I 0.603
ORUFI08G02510 Oryza rufipogon ORUFI08G02510 I 0.603
MTR_5g046040 Medicago truncatula MTR_5g046040 N 0.601
Bo9g161400 Brassica oleracea Bo9g161400 I 0.600
GLYMA07G02220 Glycine max GLYMA07G02220 I 0.600
GLYMA08G21890 Glycine max GLYMA08G21890 I 0.600
Bra008562 Brassica rapa Bra008562 I 0.600