CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DAPPUDRAFT_9471
(
Daphnia pulex
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
DAPPUDRAFT_9471
T206456_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pou1f1
M02238_2.00
Mus musculus
NTAATKHNN
NNDMATTAN
PBM
Weirauch et al.(2014)
pTH6507
0.615
0.439
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX71172
Homeodomain
2
58
RRTRTLIQGSVKSTLEKHFQMEQRPSLETIAKLATRLRIKKKIVRIWFCNRRYRERY
Links
Other
Homeodomain
family TFs
Other
Daphnia pulex
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EFV49290
Trichinella spiralis
EFV49290
I
0.599