ML45004a (Mnemiopsis leidyi)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ML45004a T220675_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSTNIG00000017092
M02109_2.00 		Tetraodon nigroviridis
YYAATCAD
HTGATTRR		 PBM
Weirauch et al.(2014)
pTH6064 		0.659 0.333
ESX1
M00291_2.00 		Homo sapiens
NNTRATNRN
NYNATYANN		 PBM
Barrera et al.(2016)
ESX1_K193R 		0.640 0.386
A1JVI6_MOUSE
M02033_2.00 		Mus musculus
HTGATTGN
NCAATCAD		 PBM
Weirauch et al.(2014)
pTH5986 		0.633 0.386
SNAPOd2T00006145001
M02230_2.00 		Oikopleura dioica
NNTRATKRNN
NNYMATYANN		 PBM
Weirauch et al.(2014)
pTH5930 		0.631 0.316
Q4RRY4_TETNG
M02169_2.00 		Tetraodon nigroviridis
NNYAATYAN
NTRATTRNN		 PBM
Weirauch et al.(2014)
pTH6326 		0.626 0.368
ceh-62
M02187_2.00 		Caenorhabditis elegans
NNYAATTRNN
NNYAATTRNN		 PBM
Weirauch et al.(2014)
pTH5492 		0.607 0.368
Lbx2
M00465_2.00 		Mus musculus
NHAABNRN
NYNVTTDN		 PBM
Berger et al.(2008)
Lbx2_3869 		0.607 0.368
LBX2
M03224_2.00 		Homo sapiens
TAAYYRSNTYNAB
VTNRANSYRRTTA		 SELEX
Jolma et al.(2013)
LBX2_1 		0.607 0.368
LBX2
M03225_2.00 		Homo sapiens
NNTAATTRVN
NBYAATTANN		 SELEX
Jolma et al.(2013)
LBX2_2 		0.607 0.368
LBX2
M05321_2.00 		Homo sapiens
HTAAYRAG
CTYRTTAD		 SELEX
Yin et al.(2017)
LBX2_eDBD_HT-SELEX_1 		0.607 0.368
LBX2
M05322_2.00 		Homo sapiens
NTAATTAAYKRG
CYMRTTAATTAN		 SELEX
Yin et al.(2017)
LBX2_eDBD_HT-SELEX_2 		0.607 0.368
LBX2
M05323_2.00 		Homo sapiens
VYTAATTRGB
VCYAATTARB		 SELEX
Yin et al.(2017)
LBX2_eDBD_HT-SELEX_3 		0.607 0.368
LBX2
M05324_2.00 		Homo sapiens
HTAAYGAG
CTCRTTAD		 SELEX
Yin et al.(2017)
LBX2_eDBD_Methyl-HT-SELEX_1 		0.607 0.368
LBX2
M05325_2.00 		Homo sapiens
ATAATTAATKAG
CTMATTAATTAT		 SELEX
Yin et al.(2017)
LBX2_eDBD_Methyl-HT-SELEX_2 		0.607 0.368
LBX2
M05326_2.00 		Homo sapiens
NNTAATKRDN
NHYMATTANN		 SELEX
Yin et al.(2017)
LBX2_eDBD_Methyl-HT-SELEX_3 		0.607 0.368
ZFHX2
M02089_2.00 		Homo sapiens
NNTRATYANN
NNTRATYANN		 PBM
Weirauch et al.(2014)
pTH5642 		0.605 0.316
Duxbl1
M02099_2.00 		Mus musculus
NTGATTRNN
NNYAATCAN		 PBM
Weirauch et al.(2014)
pTH6453 		0.604 0.316
ro
M06495_2.00 		Drosophila melanogaster
YTAATTA
TAATTAR		 B1H
Mathelier et al.(2014)
MA0241.1 		0.599 0.404
ro
M06264_2.00 		Drosophila melanogaster
NYTAATTA
TAATTARN		 B1H
Zhu et al.(2011)
Ro_Cell_FBgn0003267 		0.599 0.404
ro
M06265_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
Ro_SOLEXA_FBgn0003267 		0.599 0.404
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ML45004a-PA Homeodomain 370 428

Links

Other Homeodomain family TFs
Other Mnemiopsis leidyi TFs

211 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000021537 Astyanax mexicanus ENSAMXG00000021537 I 0.659
mxtx1 Danio rerio ENSDARG00000069382 I 0.659
ENSGACG00000003944 Gasterosteus aculeatus ENSGACG00000003944 I 0.659
ENSGMOG00000001710 Gadus morhua ENSGMOG00000001710 I 0.659
ENSORLG00000000457 Oryzias latipes ENSORLG00000000457 I 0.659
ENSPFOG00000004918 Poecilia formosa ENSPFOG00000004918 I 0.659
ENSTNIG00000017092 Tetraodon nigroviridis ENSTNIG00000017092 D 0.659
ENSTRUG00000009443 Takifugu rubripes ENSTRUG00000009443 I 0.659
ENSXMAG00000007518 Xiphophorus maculatus ENSXMAG00000007518 I 0.659
Smp_163600 Schistosoma mansoni Smp_163600 I 0.655
Sjc_0019930 Schistosoma japonicum Sjc_0019930 I 0.655
A_04097 Schistosoma haematobium A_04097 I 0.655
SROB_0001982701 Schistosoma rodhaini SROB_0001982701 I 0.655
LotgiG80576 Lottia gigantea LotgiG80576 I 0.653
ENSLOCG00000005394 Lepisosteus oculatus ENSLOCG00000005394 I 0.648
CAOG_05256 Capsaspora owczarzaki CAOG_05256 I 0.647
Sakowv30037714m.g Saccoglossus kowalevskii Sakowv30037714m.g I 0.644
Sakowv30037724m.g Saccoglossus kowalevskii Sakowv30037724m.g I 0.644
Sakowv30037725m.g Saccoglossus kowalevskii Sakowv30037725m.g I 0.644
Sakowv30037729m.g Saccoglossus kowalevskii Sakowv30037729m.g I 0.644
SPU_008112 Strongylocentrotus purpuratus SPU_008112 I 0.640
TriadG9493 Trichoplax adhaerens TriadG9493 I 0.637
LotgiG195071 Lottia gigantea LotgiG195071 I 0.636
A1JVI6_MOUSE Mus musculus A1JVI6_MOUSE D 0.633
ENSOGAG00000034008 Otolemur garnettii ENSOGAG00000034008 I 0.632
LotgiG70713 Lottia gigantea LotgiG70713 I 0.632
Sakowv30012323m.g Saccoglossus kowalevskii Sakowv30012323m.g I 0.632
XP_002156835.1 Hydra magnipapillata XP_002156835.1 I 0.632
SNAPOd2T00006145001 Oikopleura dioica SNAPOd2T00006145001 D 0.631
ENSCPOG00000014321 Cavia porcellus ENSCPOG00000014321 I 0.628
HESX1 Gasterosteus aculeatus ENSGACG00000003605 I 0.628
Hesx1 Mus musculus ENSMUSG00000040726 I 0.628
HESX1 Oryctolagus cuniculus ENSOCUG00000005972 I 0.628
ENSONIG00000004407 Oreochromis niloticus ENSONIG00000004407 I 0.628
ENSPFOG00000018967 Poecilia formosa ENSPFOG00000018967 I 0.628
Hesx1 Rattus norvegicus ENSRNOG00000014133 I 0.628
hesx1 Tetraodon nigroviridis ENSTNIG00000000083 I 0.628
HESX1 Vicugna pacos ENSVPAG00000003883 I 0.628
ENSXMAG00000009847 Xiphophorus maculatus ENSXMAG00000009847 I 0.628
HelroG148597 Helobdella robusta HelroG148597 I 0.628
Sakowv30002780m.g Saccoglossus kowalevskii Sakowv30002780m.g I 0.628
ENSTRUG00000012518 Takifugu rubripes ENSTRUG00000012518 I 0.627
Q4RRY4_TETNG Tetraodon nigroviridis Q4RRY4_TETNG D 0.626
ENSAMXG00000011097 Astyanax mexicanus ENSAMXG00000011097 I 0.624
mxtx2 Danio rerio ENSDARG00000015906 I 0.624
ENSMEUG00000004940 Macropus eugenii ENSMEUG00000004940 I 0.624
SEBOX Monodelphis domestica ENSMODG00000019242 I 0.624
ENSPSIG00000017976 Pelodiscus sinensis ENSPSIG00000017976 I 0.624
ENSSHAG00000012656 Sarcophilus harrisii ENSSHAG00000012656 I 0.624
csin106153 Clonorchis sinensis csin106153 I 0.624
T265_11894 Opisthorchis viverrini T265_11894 I 0.624
EVEC_0001106101 Enterobius vermicularis EVEC_0001106101 I 0.621
YQE_11230 Dendroctonus ponderosae YQE_11230 I 0.619
si:ch211-236k19.2 Danio rerio ENSDARG00000052165 I 0.618
ISX Pteropus vampyrus ENSPVAG00000011410 I 0.618
EVEC_0001081301 Enterobius vermicularis EVEC_0001081301 I 0.618
SMUV_0000169601 Syphacia muris SMUV_0000169601 I 0.618
fgenesh2_pg.scaffold_270000027 Branchiostoma floridae fgenesh2_pg.scaffold_270000027 I 0.617
fgenesh2_pg.scaffold_288000027 Branchiostoma floridae fgenesh2_pg.scaffold_288000027 I 0.617
SMU15023816 Schmidtea mediterranea SMU15023816 I 0.617
Ogr12626 Ophisaurus gracilis Ogr12626 I 0.616
HCOI00180000 Haemonchus contortus HCOI00180000 I 0.616
HPLM_0001598801 Haemonchus placei HPLM_0001598801 I 0.616
PTRK_0000679400 Parastrongyloides trichosuri PTRK_0000679400 I 0.616
SPAL_0001038900 Strongyloides papillosus SPAL_0001038900 I 0.616
SSTP_0000515500 Strongyloides stercoralis SSTP_0000515500 I 0.616
SVE_0549800 Strongyloides venezuelensis SVE_0549800 I 0.616
TELCIR_02731 Teladorsagia circumcincta TELCIR_02731 I 0.616
SMAR003378 Strigamia maritima SMAR003378 I 0.615
CGI_10010562 Crassostrea gigas CGI_10010562 I 0.614
NEMVEDRAFT_v1g233675 Nematostella vectensis NEMVEDRAFT_v1g233675 I 0.614
ACAC_0000925001 Angiostrongylus cantonensis ACAC_0000925001 I 0.614
ACOC_0000191801 Angiostrongylus costaricensis ACOC_0000191801 I 0.614
DICVIV_11804 Dictyocaulus viviparus DICVIV_11804 I 0.614
LBX2 Myotis lucifugus ENSMLUG00000002672 I 0.612
CRE19959 Caenorhabditis remanei CRE19959 I 0.610
ML03046a Mnemiopsis leidyi ML03046a I 0.609
lhx8b Oryzias latipes ENSORLG00000003999 I 0.608
ACEP15080 Atta cephalotes ACEP15080 I 0.607
ACYPI56397 Acyrthosiphon pisum ACYPI56397 I 0.607
CBG03019 Caenorhabditis briggsae CBG03019 I 0.607
CBN30559 Caenorhabditis brenneri CBN30559 I 0.607
CJA04962 Caenorhabditis japonica CJA04962 I 0.607
CRE01802 Caenorhabditis remanei CRE01802 I 0.607
ENSAMEG00000017222 Ailuropoda melanoleuca ENSAMEG00000017222 I 0.607
LBX2 Bos taurus ENSBTAG00000016602 I 0.607
LBX2 Canis familiaris ENSCAFG00000029526 I 0.607
LBX2 Callithrix jacchus ENSCJAG00000017451 I 0.607
LBX2 Cavia porcellus ENSCPOG00000012727 I 0.607
ENSCSAG00000015648 Chlorocebus sabaeus ENSCSAG00000015648 I 0.607
ENSDNOG00000023704 Dasypus novemcinctus ENSDNOG00000023704 I 0.607
Lbx2 Dipodomys ordii ENSDORG00000010863 I 0.607
LBX2 Equus caballus ENSECAG00000015630 I 0.607
LBX2 Erinaceus europaeus ENSEEUG00000001266 I 0.607
LBX2 Felis catus ENSFCAG00000007155 I 0.607
LBX2 Homo sapiens ENSG00000179528 D 0.607
LBX2 Gorilla gorilla ENSGGOG00000006290 I 0.607
LBX2 Loxodonta africana ENSLAFG00000021732 I 0.607
ENSMEUG00000016180 Macropus eugenii ENSMEUG00000016180 I 0.607
LBX2 Microcebus murinus ENSMICG00000006220 I 0.607
LBX2 Macaca mulatta ENSMMUG00000002125 I 0.607
LBX2 Monodelphis domestica ENSMODG00000004927 I 0.607
Lbx2 Mus musculus ENSMUSG00000034968 D 0.607
ENSNLEG00000000746 Nomascus leucogenys ENSNLEG00000000746 I 0.607
ENSOARG00000012737 Ovis aries ENSOARG00000012737 I 0.607
LBX2 Oryctolagus cuniculus ENSOCUG00000025427 I 0.607
LBX2 Otolemur garnettii ENSOGAG00000001063 I 0.607
LBX2 Ochotona princeps ENSOPRG00000014026 I 0.607
ENSPANG00000012324 Papio anubis ENSPANG00000012324 I 0.607
LBX2 Pan troglodytes ENSPTRG00000012092 I 0.607
LBX2 Pteropus vampyrus ENSPVAG00000013961 I 0.607
LOC103692168 Rattus norvegicus ENSRNOG00000008466 I 0.607
Lbx2 Rattus norvegicus ENSRNOG00000052374 I 0.607
ENSSHAG00000016897 Sarcophilus harrisii ENSSHAG00000016897 I 0.607
LBX2 Sus scrofa ENSSSCG00000008278 I 0.607
ENSSTOG00000019987 Ictidomys tridecemlineatus ENSSTOG00000019987 I 0.607
GB41411 Apis mellifera GB41411 I 0.607
ISCW008247 Ixodes scapularis ISCW008247 I 0.607
KGM_10933 Danaus plexippus KGM_10933 I 0.607
MCINX005764 Melitaea cinxia MCINX005764 I 0.607
ML053011a Mnemiopsis leidyi ML053011a I 0.607
NV22733 Nasonia vitripennis NV22733 I 0.607
SINV24682 Solenopsis invicta SINV24682 I 0.607
SPU_007242 Strongylocentrotus purpuratus SPU_007242 I 0.607
TC030553 Tribolium castaneum TC030553 I 0.607
ceh-62 Caenorhabditis elegans WBGene00011069 D 0.607
Cflo_11297--XP_001122113.1_APIME Camponotus floridanus Cflo_11297--XP_001122113.1_APIME I 0.607
ENSP00000366789-D1 Bos grunniens ENSP00000366789-D1 I 0.607
ENSP00000366789 Macaca fascicularis ENSP00000366789 I 0.607
fgenesh2_pg.scaffold_137000090 Branchiostoma floridae fgenesh2_pg.scaffold_137000090 I 0.607
fgenesh2_pg.scaffold_169000054 Branchiostoma floridae fgenesh2_pg.scaffold_169000054 I 0.607
Ocbimv22019656m.g Octopus bimaculoides Ocbimv22019656m.g I 0.607
Sakowv30006178m.g Saccoglossus kowalevskii Sakowv30006178m.g I 0.607
SMU15018041 Schmidtea mediterranea SMU15018041 I 0.606
Bm10245 Brugia malayi Bm10245 I 0.605
ENSAMXG00000007769 Astyanax mexicanus ENSAMXG00000007769 I 0.605
ZFHX2 Homo sapiens ENSG00000136367 D 0.605
ENSSHAG00000003321 Sarcophilus harrisii ENSSHAG00000003321 I 0.605
LOAG_16334 Loa loa LOAG_16334 I 0.605
ML435823a Mnemiopsis leidyi ML435823a I 0.605
WBGene00247811 Onchocerca volvulus WBGene00247811 I 0.605
BTMF_0001257301 Brugia timori BTMF_0001257301 I 0.605
EEL_0000666801 Elaeophora elaphi EEL_0000666801 I 0.605
nAv.1.0.1.g09043 Acanthocheilonema viteae nAv.1.0.1.g09043 I 0.605
nLs.2.1.2.g02872 Litomosoides sigmodontis nLs.2.1.2.g02872 I 0.605
nOo.2.0.1.g00896 Onchocerca ochengi nOo.2.0.1.g00896 I 0.605
nOo.2.0.1.g01552 Onchocerca ochengi nOo.2.0.1.g01552 I 0.605
TCLT_0000421901 Thelazia callipaeda TCLT_0000421901 I 0.605
nDi.2.2.2.g03489 Dirofilaria immitis nDi.2.2.2.g03489 I 0.603
ML00175a Mnemiopsis leidyi ML00175a I 0.602
TTAC_0000772301 Hydatigera taeniaeformis TTAC_0000772301 I 0.602
DAPPUDRAFT_47751 Daphnia pulex DAPPUDRAFT_47751 I 0.601
GK13741 Drosophila willistoni FBgn0215749 I 0.601
LCUP002473 Lucilia cuprina LCUP002473 I 0.601
WUBG_06036 Wuchereria bancrofti WUBG_06036 I 0.600
Bm6149 Brugia malayi Bm6149 I 0.600
ENSGMOG00000016250 Gadus morhua ENSGMOG00000016250 I 0.600
LOAG_03611 Loa loa LOAG_03611 I 0.600
WBGene00244490 Onchocerca volvulus WBGene00244490 I 0.600
EEL_0000172101 Elaeophora elaphi EEL_0000172101 I 0.600
GPUH_0000668601 Gongylonema pulchrum GPUH_0000668601 I 0.600
nAv.1.0.1.g09975 Acanthocheilonema viteae nAv.1.0.1.g09975 I 0.600
nDi.2.2.2.g07089 Dirofilaria immitis nDi.2.2.2.g07089 I 0.600
nOo.2.0.1.g05813 Onchocerca ochengi nOo.2.0.1.g05813 I 0.600
TCLT_0000267601 Thelazia callipaeda TCLT_0000267601 I 0.600
CpipJ_CPIJ001611 Culex pipiens CpipJ_CPIJ001611 I 0.599
AAEL010463 Aedes aegypti AAEL010463 I 0.599
AAEL015355 Aedes aegypti AAEL015355 I 0.599
AGAP002372 Anopheles gambiae AGAP002372 I 0.599
CPIJ001611 Culex quinquefasciatus CPIJ001611 I 0.599
ENSAMXG00000006461 Astyanax mexicanus ENSAMXG00000006461 I 0.599
mixl1 Danio rerio ENSDARG00000069252 I 0.599
ENSGACG00000011351 Gasterosteus aculeatus ENSGACG00000011351 I 0.599
ENSGMOG00000015044 Gadus morhua ENSGMOG00000015044 I 0.599
ENSONIG00000013479 Oreochromis niloticus ENSONIG00000013479 I 0.599
ENSPFOG00000002132 Poecilia formosa ENSPFOG00000002132 I 0.599
mixl1 Tetraodon nigroviridis ENSTNIG00000016386 I 0.599
ENSTRUG00000014706 Takifugu rubripes ENSTRUG00000014706 I 0.599
ENSXMAG00000007472 Xiphophorus maculatus ENSXMAG00000007472 I 0.599
ro Drosophila melanogaster FBgn0003267 D 0.599
ro Drosophila virilis FBgn0013136 I 0.599
GA19529 Drosophila pseudoobscura FBgn0079525 I 0.599
GF18562 Drosophila ananassae FBgn0095580 I 0.599
GG12166 Drosophila erecta FBgn0104458 I 0.599
GH23656 Drosophila grimshawi FBgn0131113 I 0.599
GI24523 Drosophila mojavensis FBgn0147245 I 0.599
GL27262 Drosophila persimilis FBgn0164843 I 0.599
GM10159 Drosophila sechellia FBgn0165110 I 0.599
GD18113 Drosophila simulans FBgn0189655 I 0.599
GE10608 Drosophila yakuba FBgn0228462 I 0.599
LotgiG160791 Lottia gigantea LotgiG160791 I 0.599
NEMVEDRAFT_v1g59496 Nematostella vectensis NEMVEDRAFT_v1g59496 I 0.599
SMAR014466 Strigamia maritima SMAR014466 I 0.599
CLEC012737 Cimex lectularius CLEC012737 I 0.599
HHAL004319-PA Halyomorpha halys HHAL004319-PA I 0.599
AALB003415 Anopheles albimanus AALB003415 I 0.599
AARA004503 Anopheles arabiensis AARA004503 I 0.599
AATE005508 Anopheles atroparvus AATE005508 I 0.599
ACOM037084 Anopheles coluzzii ACOM037084 I 0.599
ADIR002611 Anopheles dirus ADIR002611 I 0.599
AEPI003799 Anopheles epiroticus AEPI003799 I 0.599
AFAF003113 Anopheles farauti AFAF003113 I 0.599
AMEC008017 Anopheles melas AMEC008017 I 0.599
AMEM005429 Anopheles merus AMEM005429 I 0.599
AMIN004680 Anopheles minimus AMIN004680 I 0.599
AQUA009592 Anopheles quadriannulatus AQUA009592 I 0.599
ASIS019066 Anopheles sinensis ASIS019066 I 0.599
ASTEI04317 Anopheles stephensi ASTEI04317 I 0.599
LLOJ005414 Lutzomyia longipalpis LLOJ005414 I 0.599
MDOA007451 Musca domestica MDOA007451 I 0.599
PPAI003800 Phlebotomus papatasi PPAI003800 I 0.599