CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEMVEDRAFT_v1g198584
(
Nematostella vectensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
NEMVEDRAFT_v1g198584
T221021_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH
DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.679
0.185
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.679
0.185
HESX1
M05227_2.00
Homo sapiens
DYAATTRV
BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.679
0.185
HESX1
M05228_2.00
Homo sapiens
NYAATTRD
HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.679
0.185
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB
VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.623
0.293
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO48056
Homeodomain
475
520
RRNRTTYKRWQIEELESAFSINPYPTSLHEKALAVRLGLRDSRVQI
EDO48056
Homeodomain
542
587
DRKLESAFAINPYPTCLYEKALAVRLGLRDSRVQVWFQNRRAKSKR
Links
Other
Homeodomain
family TFs
Other
Nematostella vectensis
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PPAI007004
Phlebotomus papatasi
PPAI007004
I
0.712
TTRE_0000072001
Trichuris trichiura
TTRE_0000072001
I
0.707
GF12207
Drosophila ananassae
FBgn0089246
I
0.706
DICVIV_02647
Dictyocaulus viviparus
DICVIV_02647
I
0.705
Cflo_02794--XP_001120105.1_APIME
Camponotus floridanus
Cflo_02794--XP_001120105.1_APIME
I
0.701
SPU_004366
Strongylocentrotus purpuratus
SPU_004366
I
0.694
fgenesh2_pg.scaffold_23000163
Branchiostoma floridae
fgenesh2_pg.scaffold_23000163
I
0.694
L892_g24303
Steinernema scapterisci
L892_g24303
I
0.686
ADAC008104
Anopheles darlingi
ADAC008104
I
0.683
EFV55592
Trichinella spiralis
EFV55592
I
0.682
SNAPOd2T00016706001
Oikopleura dioica
SNAPOd2T00016706001
I
0.681
nRc.2.0.1.g34428
Romanomermis culicivorax
nRc.2.0.1.g34428
I
0.681
HESX1
Homo sapiens
ENSG00000163666
D
0.679
drgx
Takifugu rubripes
ENSTRUG00000013446
I
0.679
Ogr09065
Ophisaurus gracilis
Ogr09065
I
0.675
HCOI01026600
Haemonchus contortus
HCOI01026600
I
0.672
TELCIR_10796
Teladorsagia circumcincta
TELCIR_10796
I
0.672
ADAC001468
Anopheles darlingi
ADAC001468
I
0.670
PRRX2
Cavia porcellus
ENSCPOG00000021821
I
0.670
NBR_0000705501
Nippostrongylus brasiliensis
NBR_0000705501
I
0.667
MCOS_0000004601
Mesocestoides corti
MCOS_0000004601
I
0.666
OESDEN_01216
Oesophagostomum dentatum
OESDEN_01216
I
0.666
GK22877
Drosophila willistoni
FBgn0224839
I
0.664
ENSP00000360811-D1
Bos grunniens
ENSP00000360811-D1
I
0.659
NECAME_16530
Necator americanus
NECAME_16530
I
0.658
TCNE_0000653501
Toxocara canis
TCNE_0000653501
I
0.656
HMEL006244
Heliconius melpomene
HMEL006244
I
0.655
Cflo_04174--XP_001120833.1_APIME
Camponotus floridanus
Cflo_04174--XP_001120833.1_APIME
I
0.655
ENSCSAVG00000000940
Ciona savignyi
ENSCSAVG00000000940
I
0.654
Aan_R011917
Calypte anna
Aan_R011917
I
0.654
ENSMODG00000001675
Monodelphis domestica
ENSMODG00000001675
I
0.651
MCINX008871
Melitaea cinxia
MCINX008871
I
0.651
HPBE_0000873701
Heligmosomoides bakeri
HPBE_0000873701
I
0.650
HelroG173001
Helobdella robusta
HelroG173001
I
0.644
YQE_10100
Dendroctonus ponderosae
YQE_10100
I
0.644
tetur14g02510
Tetranychus urticae
tetur14g02510
I
0.641
ENSBTAP00000049813-D5
Bos grunniens
ENSBTAP00000049813-D5
I
0.639
ALUE_0000848601
Ascaris lumbricoides
ALUE_0000848601
I
0.638
TTAC_0000027101
Hydatigera taeniaeformis
TTAC_0000027101
I
0.638
NOBOX
Canis familiaris
ENSCAFG00000003500
I
0.637
ENSP00000419457-D1
Bos grunniens
ENSP00000419457-D1
I
0.637
SVUK_0001056001
Strongylus vulgaris
SVUK_0001056001
I
0.630
EEL_0000220001
Elaeophora elaphi
EEL_0000220001
I
0.629
Alligator_sinensis_CCG014496.1
Alligator sinensis
Alligator_sinensis_CCG014496.1
I
0.627
EVEC_0000357701
Enterobius vermicularis
EVEC_0000357701
I
0.627
Cmyd_10012400
Chelonia mydas
Cmyd_10012400
I
0.626
TELCIR_07728
Teladorsagia circumcincta
TELCIR_07728
I
0.625
LHX6
Gorilla gorilla
ENSGGOG00000008310
I
0.624
HPLM_0000971301
Haemonchus placei
HPLM_0000971301
I
0.624
NOBOX
Homo sapiens
ENSG00000106410
D
0.623
NOBOX
Pan troglodytes
ENSPTRG00000019828
I
0.623
Pvit_13361
Pogona vitticeps
Pvit_13361
I
0.623
ENSTSYG00000014450
Tarsius syrichta
ENSTSYG00000014450
I
0.621
NOBOX
Callithrix jacchus
ENSCJAG00000009917
I
0.620
ENSCSAG00000007090
Chlorocebus sabaeus
ENSCSAG00000007090
I
0.620
NOBOX
Equus caballus
ENSECAG00000003123
I
0.620
NOBOX
Felis catus
ENSFCAG00000004352
I
0.620
NOBOX
Gorilla gorilla
ENSGGOG00000022185
I
0.620
NOBOX
Macaca mulatta
ENSMMUG00000020609
I
0.620
ENSNLEG00000003406
Nomascus leucogenys
ENSNLEG00000003406
I
0.620
NOBOX
Oryctolagus cuniculus
ENSOCUG00000001027
I
0.620
NOBOX
Otolemur garnettii
ENSOGAG00000010413
I
0.620
ENSPANG00000018829
Papio anubis
ENSPANG00000018829
I
0.620
ENSMMUP00000027138
Macaca fascicularis
ENSMMUP00000027138
I
0.620
TCNE_0001081001
Toxocara canis
TCNE_0001081001
I
0.619
Cmyd_10001740
Chelonia mydas
Cmyd_10001740
I
0.618
SSLN_0001460801
Schistocephalus solidus
SSLN_0001460801
I
0.618
BGLB004491
Biomphalaria glabrata
BGLB004491
I
0.616
T265_14002
Opisthorchis viverrini
T265_14002
I
0.616
NOBOX
Myotis lucifugus
ENSMLUG00000004209
I
0.615
ENSMPUG00000007079
Mustela putorius furo
ENSMPUG00000007079
I
0.615
ENSSTOG00000026570
Ictidomys tridecemlineatus
ENSSTOG00000026570
I
0.615
meox1
Takifugu rubripes
ENSTRUG00000005193
I
0.615
Myotis_brandtii_NOBOX_10026198
Myotis brandtii
Myotis_brandtii_NOBOX_10026198
I
0.615
ENSACAG00000002147
Anolis carolinensis
ENSACAG00000002147
I
0.614
ASIM_0001230001
Anisakis simplex
ASIM_0001230001
I
0.614
MCINX007054
Melitaea cinxia
MCINX007054
I
0.613
SINV13346
Solenopsis invicta
SINV13346
I
0.613
AFAF008499
Anopheles farauti
AFAF008499
I
0.610
DLX3
Bos taurus
ENSBTAG00000017409
I
0.609
lhx8b
Takifugu rubripes
ENSTRUG00000017607
I
0.609
BGLB013824
Biomphalaria glabrata
BGLB013824
I
0.609
TC000483
Tribolium castaneum
TC000483
I
0.608
ACUA004306
Anopheles culicifacies
ACUA004306
I
0.608
ENSFCAG00000029037
Felis catus
ENSFCAG00000029037
I
0.607
tetur02g13510
Tetranychus urticae
tetur02g13510
I
0.605
DLX4
Bos taurus
ENSBTAG00000007353
I
0.604
DLX4
Myotis lucifugus
ENSMLUG00000007268
I
0.604
ENSOARG00000005572
Ovis aries
ENSOARG00000005572
I
0.604
L798_06393
Zootermopsis nevadensis
L798_06393
I
0.604
ENSBTAP00000009672-D1
Bos grunniens
ENSBTAP00000009672-D1
I
0.604
ACUA026833
Anopheles culicifacies
ACUA026833
I
0.602
AMAM000848
Anopheles maculatus
AMAM000848
I
0.602
HPLM_0001894101
Haemonchus placei
HPLM_0001894101
I
0.600
CGI_10016653
Crassostrea gigas
CGI_10016653
I
0.599
EFV57629
Trichinella spiralis
EFV57629
I
0.599
ENSPSIG00000014030
Pelodiscus sinensis
ENSPSIG00000014030
I
0.599
GF13343
Drosophila ananassae
FBgn0090375
I
0.599
D917_01051
Trichinella nativa
D917_01051
I
0.599