CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PHSY_006920
(
Pseudozyma hubeiensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
PHSY_006920
T222275_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
UM00578
M02177_2.00
Ustilago maydis
NNYVATCNN
NNGATBRNN
PBM
Weirauch et al.(2014)
pTH6313
0.704
0.846
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GAC99319
Homeodomain
190
241
GHDSDAVRILEQAFEHTPNITQAEKFQLAEATGLQPKQVTIWFQNRRNRKGK
Links
Other
Homeodomain
family TFs
Other
Pseudozyma hubeiensis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
UM00578
Ustilago maydis
UM00578
D
0.704
UHOR_00887
Ustilago hordei
UHOR_00887
I
0.693
PSEUBRA_SCAF3g04018
Pseudozyma brasiliensis
PSEUBRA_SCAF3g04018
I
0.648
ENSTGUG00000011379
Taeniopygia guttata
ENSTGUG00000011379
I
0.634
Aan_R001812
Calypte anna
Aan_R001812
N
0.634
Aan_R007134
Calypte anna
Aan_R007134
I
0.634
Afo_R002867
Aptenodytes forsteri
Afo_R002867
I
0.634
Hba_10731
Heterorhabditis bacteriophora
Hba_10731
N
0.634
Cucsa.339580
Cucumis sativus
Cucsa.339580
I
0.628
Afo_R002868
Aptenodytes forsteri
Afo_R002868
I
0.616
PLEOSDRAFT_1026389
Pleurotus ostreatus
PLEOSDRAFT_1026389
N
0.615
PaG_02135
Pseudozyma aphidis
PaG_02135
I
0.609
F775_01938
Aegilops tauschii
F775_01938
N
0.608
Pavir.Ib00453
Panicum virgatum
Pavir.Ib00453
N
0.604
SapurV1A.0059s0380
Salix purpurea
SapurV1A.0059s0380
N
0.601
TCM_013821
Theobroma cacao
TCM_013821
I
0.600