CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ppa-ceh-27
(
Pristionchus pacificus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
PPA02679
T222604_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA02679
Homeodomain
60
112
HHDREIQVQELERRFRTNKYLNAADRESLARGIGLSATQVKIWFQNQRYKCKR
Links
Other
Homeodomain
family TFs
Other
Pristionchus pacificus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG05223
Caenorhabditis briggsae
CBG05223
N
0.659
ANCCAN_25804
Ancylostoma caninum
ANCCAN_25804
N
0.659
ACAC_0000671101
Angiostrongylus cantonensis
ACAC_0000671101
N
0.645
ACOC_0000865601
Angiostrongylus costaricensis
ACOC_0000865601
N
0.645
HHAL001275-PA
Halyomorpha halys
HHAL001275-PA
N
0.639
BGLB001550
Biomphalaria glabrata
BGLB001550
N
0.634
Ogr09559
Ophisaurus gracilis
Ogr09559
N
0.611