CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPA27300
(
Pristionchus pacificus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
PPA27300
T222653_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA27300
Homeodomain
9
29
RRERMTYDRNQLKTLEDQFKV
PPA27300
Homeodomain
24
40
EDQFKVWFKNRRAKQRG
Links
Other
Homeodomain
family TFs
Other
Pristionchus pacificus
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PEQ_0001069001
Parascaris equorum
PEQ_0001069001
I
0.738
BGLB009977
Biomphalaria glabrata
BGLB009977
I
0.725
HMEL016421
Heliconius melpomene
HMEL016421
I
0.725
BGLB014161
Biomphalaria glabrata
BGLB014161
I
0.719
L798_10521
Zootermopsis nevadensis
L798_10521
N
0.675
CpipJ_CPIJ006790
Culex pipiens
CpipJ_CPIJ006790
N
0.675
CPIJ006790
Culex quinquefasciatus
CPIJ006790
N
0.675
Cmyd_10006547
Chelonia mydas
Cmyd_10006547
N
0.662
L892_g9682
Steinernema scapterisci
L892_g9682
I
0.662
GM12914
Drosophila sechellia
FBgn0167846
I
0.662
RHOXF1
Tursiops truncatus
ENSTTRG00000011466
N
0.651
HPLM_0000384301
Haemonchus placei
HPLM_0000384301
N
0.644
SPU_006159
Strongylocentrotus purpuratus
SPU_006159
N
0.630
PRRX2
Cavia porcellus
ENSCPOG00000021821
I
0.615
MCINX008871
Melitaea cinxia
MCINX008871
I
0.615
Aan_R011917
Calypte anna
Aan_R011917
I
0.615
HPBE_0000873701
Heligmosomoides bakeri
HPBE_0000873701
I
0.600