CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr08262
(
Ophisaurus gracilis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Ogr08262
T226513_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HOMEZ
M03242_2.00
Homo sapiens
WWWAATCGTTTW
WAAACGATTWWW
SELEX
Jolma et al.(2013)
HOMEZ_1
0.613
0.731
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr08262
Homeodomain
42
86
GNQHLLQTFSYFPYPSLSDLALLCLRHGLHMEKVKAWFMAQRLRC
Ogr08262
Homeodomain
306
361
RKPRRKTKEQLDVLKSFFLHCQWARREDYHQLEKITGLPRAEIIQWFGDTRYALKH
Ogr08262
Homeodomain
389
432
SHPDTSPLERYWATHLQLRESDLPTLCHESGMEAEQVLKWFHSH
Links
Other
Homeodomain
family TFs
Other
Ophisaurus gracilis
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HOMEZ
Anolis carolinensis
ENSACAG00000007379
I
0.750
Pvit_09633
Pogona vitticeps
Pvit_09633
N
0.712
HOMEZ
Monodelphis domestica
ENSMODG00000024443
I
0.649
HOMEZ
Ornithorhynchus anatinus
ENSOANG00000007642
I
0.639
ENSSHAG00000014748
Sarcophilus harrisii
ENSSHAG00000014748
I
0.638
ENSTSYG00000004720
Tarsius syrichta
ENSTSYG00000004720
I
0.626
Homez
Mus musculus
ENSMUSG00000057156
D
0.625
Homez
Rattus norvegicus
ENSRNOG00000014887
I
0.625
ENSAMEG00000007717
Ailuropoda melanoleuca
ENSAMEG00000007717
I
0.623
HOMEZ
Canis familiaris
ENSCAFG00000011468
I
0.623
HOMEZ
Felis catus
ENSFCAG00000030011
I
0.623
ENSMPUG00000006797
Mustela putorius furo
ENSMPUG00000006797
I
0.623
HOMEZ
Sus scrofa
ENSSSCG00000028190
I
0.621
HOMEZ
Otolemur garnettii
ENSOGAG00000032616
I
0.620
HOMEZ
Myotis lucifugus
ENSMLUG00000004922
I
0.616
Myotis_brandtii_HOMEZ_10009432
Myotis brandtii
Myotis_brandtii_HOMEZ_10009432
I
0.616
HOMEZ
Bos taurus
ENSBTAG00000032686
I
0.614
ENSOARG00000019342
Ovis aries
ENSOARG00000019342
I
0.614
ENSCSAG00000016052
Chlorocebus sabaeus
ENSCSAG00000016052
I
0.613
HOMEZ
Homo sapiens
ENSG00000215271
D
0.613
HOMEZ
Gorilla gorilla
ENSGGOG00000002195
I
0.613
HOMEZ
Macaca mulatta
ENSMMUG00000014744
I
0.613
ENSPANG00000004893
Papio anubis
ENSPANG00000004893
I
0.613
HOMEZ
Procavia capensis
ENSPCAG00000005821
I
0.613
ENSPPYG00000005662
Pongo abelii
ENSPPYG00000005662
I
0.613
HOMEZ
Pan troglodytes
ENSPTRG00000006165
I
0.613
ENSSTOG00000020653
Ictidomys tridecemlineatus
ENSSTOG00000020653
I
0.613
ENSMMUP00000019353
Macaca fascicularis
ENSMMUP00000019353
I
0.613
ENSCPOG00000025949
Cavia porcellus
ENSCPOG00000025949
I
0.609
HOMEZ
Oryctolagus cuniculus
ENSOCUG00000012510
I
0.602