CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_4190017
(
Physcomitrella patens
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
estExt_fgenesh1_pg.C_4190017
T227341_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_4190017
Homeodomain
23
54
ISRKKKSASQTEVLERAYAALCHQPRCDAYNQ
estExt_fgenesh1_pg.C_4190017
Homeodomain
71
116
LFIISRAIAVEKYPSEATRQKLVRDLDLSDKQLQIWFTHRRYKDRR
Links
Other
Homeodomain
family TFs
Other
Physcomitrella patens
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_890072
Physcomitrella patens
estExt_fgenesh2_pg.C_890072
N
0.813