CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf024314m
(
Mimulus guttatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
mgf024314m
T227750_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf024314m
Homeodomain
14
75
SSGRWSPTQEQVMVLHALYRSGLTKPNPSQVERITSQLSLYGRVQSKNVLYWFQNRKARDRK
Links
Other
Homeodomain
family TFs
Other
Mimulus guttatus
TFs
268 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10038480.g
Linum usitatissimum
Lus10038480.g
I
0.661
evm.TU.supercontig_139.11
Carica papaya
evm.TU.supercontig_139.11
I
0.661
mgf023746m
Mimulus guttatus
mgf023746m
I
0.659
PRUPE_ppa019793mg
Prunus persica
PRUPE_ppa019793mg
I
0.655
MDP0000293200
Malus domestica
MDP0000293200
I
0.655
MDP0000163159
Malus domestica
MDP0000163159
I
0.655
Pm000753
Prunus mume
Pm000753
I
0.655
gene14025-v1.0-hybrid
Fragaria vesca
gene14025-v1.0-hybrid
I
0.655
MLOC_74758
Hordeum vulgare
MLOC_74758
I
0.646
Si002900m.g
Setaria italica
Si002900m.g
I
0.646
F775_30123
Aegilops tauschii
F775_30123
I
0.646
GRMZM2G116063
Zea mays
GRMZM2G116063
I
0.646
Sb03g040210
Sorghum bicolor
Sb03g040210
I
0.646
OB01G46390
Oryza brachyantha
OB01G46390
I
0.646
OPUNC01G36520
Oryza punctata
OPUNC01G36520
I
0.646
ORGLA01G0314800
Oryza glaberrima
ORGLA01G0314800
I
0.646
ORUFI01G41010
Oryza rufipogon
ORUFI01G41010
I
0.646
WOX9
Oryza sativa
OS01G0854500
I
0.646
ONIVA01G14610
Oryza nivara
ONIVA01G14610
I
0.646
OMERI01G34630
Oryza meridionalis
OMERI01G34630
I
0.646
OBART01G37660
Oryza barthii
OBART01G37660
I
0.646
OGLUM01G41580
Oryza glumaepatula
OGLUM01G41580
I
0.646
OLONG_007155
Oryza longistaminata
OLONG_007155
I
0.646
BRADI2G55270
Brachypodium distachyon
BRADI2G55270
I
0.646
GRMZM2G478396
Zea mays
GRMZM2G478396
I
0.646
BGIOSGA000469
Oryza indica
BGIOSGA000469
I
0.646
TRIUR3_26391
Triticum urartu
TRIUR3_26391
I
0.646
Pavir.Ea03790
Panicum virgatum
Pavir.Ea03790
I
0.646
Pavir.J34036
Panicum virgatum
Pavir.J34036
I
0.646
Gorai.003G138900
Gossypium raimondii
Gorai.003G138900
I
0.645
LPERR01G32330
Leersia perrieri
LPERR01G32330
I
0.645
gene20925-v1.0-hybrid
Fragaria vesca
gene20925-v1.0-hybrid
I
0.642
29669.m000805
Ricinus communis
29669.m000805
I
0.642
TCM_042593
Theobroma cacao
TCM_042593
I
0.642
Lus10028271.g
Linum usitatissimum
Lus10028271.g
I
0.642
Gorai.011G283000
Gossypium raimondii
Gorai.011G283000
I
0.642
PGSC0003DMG400020731
Solanum tuberosum
PGSC0003DMG400020731
I
0.642
cassava26880.m1
Manihot esculenta
cassava26880.m1
I
0.642
SapurV1A.0061s0020
Salix purpurea
SapurV1A.0061s0020
I
0.642
PRUPE_ppa020183mg
Prunus persica
PRUPE_ppa020183mg
I
0.642
evm.TU.supercontig_19.201
Carica papaya
evm.TU.supercontig_19.201
I
0.642
Eucgr.G03036
Eucalyptus grandis
Eucgr.G03036
I
0.642
MDP0000600720
Malus domestica
MDP0000600720
I
0.642
POPTR_0010s19950
Populus trichocarpa
POPTR_0010s19950
I
0.642
Solyc03g096300.2
Solanum lycopersicum
Solyc03g096300.2
I
0.642
mgf008378m
Mimulus guttatus
mgf008378m
I
0.642
PK12498.1
Cannabis sativa
PK12498.1
I
0.642
Aquca_004_00311
Aquilegia coerulea
Aquca_004_00311
I
0.642
Lus10040219.g
Linum usitatissimum
Lus10040219.g
I
0.642
MDP0000213910
Malus domestica
MDP0000213910
I
0.642
Pm018890
Prunus mume
Pm018890
I
0.642
GLYMA02G42200
Glycine max
GLYMA02G42200
I
0.642
VIT_13s0019g03460
Vitis vinifera
VIT_13s0019g03460
I
0.642
GLYMA11G34990
Glycine max
GLYMA11G34990
I
0.641
orange1.1g036802m.g
Citrus sinensis
orange1.1g036802m.g
I
0.641
Ciclev10033868m.g
Citrus clementina
Ciclev10033868m.g
I
0.641
cassava4109.m1
Manihot esculenta
cassava4109.m1
I
0.641
GLYMA18G03350
Glycine max
GLYMA18G03350
I
0.641
Ca_10316
Cicer arietinum
Ca_10316
I
0.641
Lus10018011.g
Linum usitatissimum
Lus10018011.g
I
0.638
MTR_5g081990
Medicago truncatula
MTR_5g081990
I
0.638
LjSGA_103126.1
Lotus japonicus
LjSGA_103126.1
I
0.638
Cucsa.111520
Cucumis sativus
Cucsa.111520
I
0.638
AMTR_s00029p00225270
Amborella trichopoda
AMTR_s00029p00225270
I
0.638
Cla019215
Citrullus lanatus
Cla019215
I
0.638
Lus10042007.g
Linum usitatissimum
Lus10042007.g
I
0.638
gene14621-v1.0-hybrid
Fragaria vesca
gene14621-v1.0-hybrid
I
0.635
MTR_7g060630
Medicago truncatula
MTR_7g060630
I
0.631
GLYMA07G15710
Glycine max
GLYMA07G15710
I
0.631
GLYMA18G39520
Glycine max
GLYMA18G39520
I
0.631
Cla006686
Citrullus lanatus
Cla006686
I
0.630
Cucsa.136500
Cucumis sativus
Cucsa.136500
I
0.630
SELMODRAFT_438787
Selaginella moellendorffii
SELMODRAFT_438787
I
0.630
SELMODRAFT_451355
Selaginella moellendorffii
SELMODRAFT_451355
I
0.630
GSMUA_Achr7G14860_001
Musa acuminata
GSMUA_Achr7G14860_001
I
0.630
Cagra.1317s0079
Capsella grandiflora
Cagra.1317s0079
I
0.625
Bo9g138280
Brassica oleracea
Bo9g138280
I
0.625
WOX2
Arabidopsis lyrata
Al_scaffold_0008_2427
I
0.625
Cagra.5131s0005
Capsella grandiflora
Cagra.5131s0005
I
0.625
Bra009132
Brassica rapa
Bra009132
I
0.625
Bostr.26833s0310
Boechera stricta
Bostr.26833s0310
I
0.625
GLYMA12G06895
Glycine max
GLYMA12G06895
I
0.625
Bostr.13129s0396
Boechera stricta
Bostr.13129s0396
I
0.625
WOX7
Arabidopsis thaliana
AT5G05770
I
0.625
Bo9g176920
Brassica oleracea
Bo9g176920
I
0.625
orange1.1g046813m.g
Citrus sinensis
orange1.1g046813m.g
I
0.625
Carubv10003830m.g
Capsella rubella
Carubv10003830m.g
I
0.625
Bra028749
Brassica rapa
Bra028749
I
0.625
Thhalv10015842m.g
Eutrema salsugineum
Thhalv10015842m.g
I
0.625
Thhalv10014457m.g
Eutrema salsugineum
Thhalv10014457m.g
I
0.625
Bo2g026810
Brassica oleracea
Bo2g026810
I
0.625
MTR_4g063735
Medicago truncatula
MTR_4g063735
I
0.625
Bo2g007050
Brassica oleracea
Bo2g007050
I
0.625
Ca_16691
Cicer arietinum
Ca_16691
I
0.625
WOX2
Arabidopsis thaliana
AT5G59340
I
0.625
GSMUA_Achr10G26570_001
Musa acuminata
GSMUA_Achr10G26570_001
I
0.625
Carubv10028333m.g
Capsella rubella
Carubv10028333m.g
I
0.625
WOX7
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_6000438
I
0.625
Ciclev10029815m.g
Citrus clementina
Ciclev10029815m.g
I
0.625
cassava28422.m1
Manihot esculenta
cassava28422.m1
I
0.624
PRUPE_ppa025093mg
Prunus persica
PRUPE_ppa025093mg
I
0.624
Pm026748
Prunus mume
Pm026748
I
0.624
Solyc02g083950.2
Solanum lycopersicum
Solyc02g083950.2
I
0.624
27471.m000409
Ricinus communis
27471.m000409
I
0.624
cassava21140.m1
Manihot esculenta
cassava21140.m1
I
0.624
TCM_000215
Theobroma cacao
TCM_000215
I
0.624
cassava26594.m1
Manihot esculenta
cassava26594.m1
I
0.624
evm.TU.supercontig_65.159
Carica papaya
evm.TU.supercontig_65.159
I
0.624
Lus10041909.g
Linum usitatissimum
Lus10041909.g
I
0.624
GLYMA11G08091
Glycine max
GLYMA11G08091
I
0.624
Lus10028457.g
Linum usitatissimum
Lus10028457.g
I
0.624
Gorai.011G098600
Gossypium raimondii
Gorai.011G098600
I
0.624
GLYMA01G37190
Glycine max
GLYMA01G37190
I
0.624
Ca_01974
Cicer arietinum
Ca_01974
I
0.624
LjT48K17.10.nd
Lotus japonicus
LjT48K17.10.nd
I
0.624
MDP0000580356
Malus domestica
MDP0000580356
I
0.624
MDP0000394158
Malus domestica
MDP0000394158
I
0.624
Gorai.008G063200
Gossypium raimondii
Gorai.008G063200
I
0.624
GSMUA_Achr7G07430_001
Musa acuminata
GSMUA_Achr7G07430_001
I
0.624
Eucgr.J02429
Eucalyptus grandis
Eucgr.J02429
I
0.624
Cla013483
Citrullus lanatus
Cla013483
I
0.624
mgf003738m
Mimulus guttatus
mgf003738m
I
0.624
Cucsa.379650
Cucumis sativus
Cucsa.379650
I
0.624
PGSC0003DMG400003561
Solanum tuberosum
PGSC0003DMG400003561
I
0.624
MTR_5g021930
Medicago truncatula
MTR_5g021930
I
0.624
Cla014504
Citrullus lanatus
Cla014504
I
0.624
evm.TU.supercontig_6.244
Carica papaya
evm.TU.supercontig_6.244
I
0.624
WUS
Vitis vinifera
VIT_04s0023g03310
I
0.624
Cucsa.043520
Cucumis sativus
Cucsa.043520
I
0.624
Ca_06508
Cicer arietinum
Ca_06508
I
0.618
MTR_4g084550
Medicago truncatula
MTR_4g084550
I
0.618
Thhalv10017168m.g
Eutrema salsugineum
Thhalv10017168m.g
I
0.618
GLYMA20G02161
Glycine max
GLYMA20G02161
I
0.618
WOX3
Arabidopsis thaliana
AT2G28610
I
0.618
Carubv10024767m.g
Capsella rubella
Carubv10024767m.g
I
0.618
Bostr.27991s0061
Boechera stricta
Bostr.27991s0061
I
0.618
Cagra.5013s0004
Capsella grandiflora
Cagra.5013s0004
I
0.618
PRS
Arabidopsis lyrata
fgenesh2_kg.4__832__AT2G28610.1
I
0.618
gene32456-v1.0-hybrid
Fragaria vesca
gene32456-v1.0-hybrid
I
0.617
GLYMA07G34425
Glycine max
GLYMA07G34425
I
0.617
Eucgr.B02435
Eucalyptus grandis
Eucgr.B02435
I
0.616
cassava26411.m1
Manihot esculenta
cassava26411.m1
I
0.616
TCM_041963
Theobroma cacao
TCM_041963
I
0.616
GRMZM2G122537
Zea mays
GRMZM2G122537
I
0.614
GRMZM2G140083
Zea mays
GRMZM2G140083
I
0.614
Sb09g002010
Sorghum bicolor
Sb09g002010
I
0.614
Si022944m.g
Setaria italica
Si022944m.g
I
0.614
Bra000484
Brassica rapa
Bra000484
I
0.614
GSMUA_Achr5G29220_001
Musa acuminata
GSMUA_Achr5G29220_001
I
0.614
Bo3g040080
Brassica oleracea
Bo3g040080
I
0.614
TRIUR3_16981
Triticum urartu
TRIUR3_16981
I
0.614
Pavir.J22602
Panicum virgatum
Pavir.J22602
I
0.614
WOX2
Oryza indica
BGIOSGA019069
I
0.613
WOX2
Oryza sativa
OS05G0118700
I
0.613
OPUNC05G01220
Oryza punctata
OPUNC05G01220
I
0.613
ORUFI05G01360
Oryza rufipogon
ORUFI05G01360
I
0.613
OMERI05G01360
Oryza meridionalis
OMERI05G01360
I
0.613
LPERR05G01200
Leersia perrieri
LPERR05G01200
I
0.613
OGLUM05G01320
Oryza glumaepatula
OGLUM05G01320
I
0.613
ONIVA05G01350
Oryza nivara
ONIVA05G01350
I
0.613
OBART05G01300
Oryza barthii
OBART05G01300
I
0.613
AMTR_s00023p00181320
Amborella trichopoda
AMTR_s00023p00181320
I
0.612
Aquca_046_00011
Aquilegia coerulea
Aquca_046_00011
I
0.612
30039.m000243
Ricinus communis
30039.m000243
I
0.612
PRS
Vitis vinifera
VIT_06s0004g03780
I
0.612
Gorai.009G103500
Gossypium raimondii
Gorai.009G103500
I
0.612
GSMUA_Achr4G29470_001
Musa acuminata
GSMUA_Achr4G29470_001
I
0.611
AMTR_s00051p00020930
Amborella trichopoda
AMTR_s00051p00020930
I
0.610
SapurV1A.0718s0010
Salix purpurea
SapurV1A.0718s0010
I
0.608
SapurV1A.0406s0010
Salix purpurea
SapurV1A.0406s0010
I
0.608
SapurV1A.0357s0040
Salix purpurea
SapurV1A.0357s0040
I
0.608
POPTR_0012s04510
Populus trichocarpa
POPTR_0012s04510
I
0.608
POPTR_0015s04520
Populus trichocarpa
POPTR_0015s04520
I
0.608
GLYMA07G11372
Glycine max
GLYMA07G11372
I
0.606
Eucgr.B00945
Eucalyptus grandis
Eucgr.B00945
I
0.606
Ca_10352
Cicer arietinum
Ca_10352
I
0.606
cassava13526.valid.m1
Manihot esculenta
cassava13526.valid.m1
I
0.606
GLYMA05G33850
Glycine max
GLYMA05G33850
I
0.606
GRMZM2G108933
Zea mays
GRMZM2G108933
I
0.606
VIT_17s0000g02460
Vitis vinifera
VIT_17s0000g02460
I
0.606
fgenesh2_kg.3__1989__AT3G18010.1
Arabidopsis lyrata
fgenesh2_kg.3__1989__AT3G18010.1
I
0.606
Ciclev10008783m.g
Citrus clementina
Ciclev10008783m.g
I
0.606
LjSGA_115909.1
Lotus japonicus
LjSGA_115909.1
I
0.606
MTR_8g107210
Medicago truncatula
MTR_8g107210
I
0.606
Pavir.Ea03339
Panicum virgatum
Pavir.Ea03339
I
0.606
orange1.1g043602m.g
Citrus sinensis
orange1.1g043602m.g
I
0.606
GLYMA08G05831
Glycine max
GLYMA08G05831
I
0.606
AMTR_s00010p00122680
Amborella trichopoda
AMTR_s00010p00122680
I
0.606
Gorai.008G289800
Gossypium raimondii
Gorai.008G289800
I
0.606
28102.m000106
Ricinus communis
28102.m000106
I
0.606
gene09389-v1.0-hybrid
Fragaria vesca
gene09389-v1.0-hybrid
I
0.606
Carubv10013929m.g
Capsella rubella
Carubv10013929m.g
I
0.606
evm.TU.supercontig_3.402
Carica papaya
evm.TU.supercontig_3.402
I
0.606
MDP0000144307
Malus domestica
MDP0000144307
I
0.606
TCM_012755
Theobroma cacao
TCM_012755
I
0.606
MDP0000445859
Malus domestica
MDP0000445859
I
0.606
Cla018739
Citrullus lanatus
Cla018739
I
0.606
Pm025084
Prunus mume
Pm025084
I
0.606
PK07906.1
Cannabis sativa
PK07906.1
I
0.606
mgf022370m
Mimulus guttatus
mgf022370m
I
0.606
Thhalv10022042m.g
Eutrema salsugineum
Thhalv10022042m.g
I
0.606
chr4.CM0042.2350.nc
Lotus japonicus
chr4.CM0042.2350.nc
I
0.606
Cucsa.121900
Cucumis sativus
Cucsa.121900
I
0.606
GLYMA13G41000
Glycine max
GLYMA13G41000
I
0.606
PGSC0003DMG400005670
Solanum tuberosum
PGSC0003DMG400005670
I
0.606
cassava41581.m1
Manihot esculenta
cassava41581.m1
I
0.606
GLYMA15G04460
Glycine max
GLYMA15G04460
I
0.606
WOX1
Arabidopsis thaliana
AT3G18010
I
0.606
PRUPE_ppa017419mg
Prunus persica
PRUPE_ppa017419mg
I
0.606
Cagra.0456s0008
Capsella grandiflora
Cagra.0456s0008
I
0.606
Solyc03g118770.2
Solanum lycopersicum
Solyc03g118770.2
I
0.606
cassava16590.m1
Manihot esculenta
cassava16590.m1
I
0.606
Sb03g039380
Sorghum bicolor
Sb03g039380
I
0.606
MDP0000219162
Malus domestica
MDP0000219162
I
0.606
Aquca_091_00003
Aquilegia coerulea
Aquca_091_00003
I
0.606
GLYMA09G30831
Glycine max
GLYMA09G30831
I
0.606
fgenesh2_kg.143__1__AT3G18010.1
Arabidopsis lyrata
fgenesh2_kg.143__1__AT3G18010.1
I
0.606
Bostr.19424s0870
Boechera stricta
Bostr.19424s0870
I
0.606
Bra022267
Brassica rapa
Bra022267
I
0.605
Ciclev10017657m.g
Citrus clementina
Ciclev10017657m.g
I
0.605
WOX1
Vitis vinifera
VIT_01s0011g05020
I
0.605
LjSGA_059316.1
Lotus japonicus
LjSGA_059316.1
I
0.605
cassava32199.m1
Manihot esculenta
cassava32199.m1
I
0.605
Bo3g071360
Brassica oleracea
Bo3g071360
I
0.605
Bo5g121370
Brassica oleracea
Bo5g121370
I
0.605
orange1.1g035594m.g
Citrus sinensis
orange1.1g035594m.g
I
0.605
Bra001694
Brassica rapa
Bra001694
I
0.605
29816.m000691
Ricinus communis
29816.m000691
I
0.605
GRMZM2G339751
Zea mays
GRMZM2G339751
I
0.604
Pavir.Eb03715
Panicum virgatum
Pavir.Eb03715
I
0.604
Pavir.J34412
Panicum virgatum
Pavir.J34412
I
0.602
WOX3
Oryza indica
BGIOSGA036831
I
0.602
Pavir.J24082
Panicum virgatum
Pavir.J24082
I
0.602
Traes_5DS_903A67B97
Triticum aestivum
Traes_5DS_903A67B97
I
0.602
Traes_5DL_193218298
Triticum aestivum
Traes_5DL_193218298
I
0.602
F775_52565
Aegilops tauschii
F775_52565
I
0.602
GSMUA_Achr9G04090_001
Musa acuminata
GSMUA_Achr9G04090_001
I
0.602
ONIVA12G00010
Oryza nivara
ONIVA12G00010
I
0.602
Si027421m.g
Setaria italica
Si027421m.g
I
0.602
ONIVA11G00010
Oryza nivara
ONIVA11G00010
I
0.602
OMERI11G00160
Oryza meridionalis
OMERI11G00160
I
0.602
OGLUM12G00010
Oryza glumaepatula
OGLUM12G00010
I
0.602
OLONG_026278
Oryza longistaminata
OLONG_026278
I
0.602
OPUNC11G00180
Oryza punctata
OPUNC11G00180
I
0.602
OPUNC12G00190
Oryza punctata
OPUNC12G00190
I
0.602
OS12G0101600
Oryza sativa
OS12G0101600
I
0.602
Sb05g003490
Sorghum bicolor
Sb05g003490
I
0.602
OS11G0102100
Oryza sativa
OS11G0102100
I
0.602
Si012474m.g
Setaria italica
Si012474m.g
I
0.602
ORGLA11G0000600
Oryza glaberrima
ORGLA11G0000600
I
0.602
ORUFI04G30250
Oryza rufipogon
ORUFI04G30250
I
0.602
GRMZM2G069028
Zea mays
GRMZM2G069028
I
0.602
OGLUM11G00100
Oryza glumaepatula
OGLUM11G00100
I
0.602
LPERR11G00110
Leersia perrieri
LPERR11G00110
I
0.602
Traes_5BL_2E6FA4A97
Triticum aestivum
Traes_5BL_2E6FA4A97
I
0.602
GSMUA_Achr2G16080_001
Musa acuminata
GSMUA_Achr2G16080_001
I
0.602
Traes_5BS_439DB52FE
Triticum aestivum
Traes_5BS_439DB52FE
I
0.602
LPERR12G00390
Leersia perrieri
LPERR12G00390
I
0.602
GSMUA_Achr7G18230_001
Musa acuminata
GSMUA_Achr7G18230_001
I
0.602
OBART11G00060
Oryza barthii
OBART11G00060
I
0.602
MLOC_7772
Hordeum vulgare
MLOC_7772
I
0.602
OB05G19220
Oryza brachyantha
OB05G19220
I
0.602
Lus10016026.g
Linum usitatissimum
Lus10016026.g
I
0.601
PGSC0003DMG400025358
Solanum tuberosum
PGSC0003DMG400025358
I
0.600
Ciclev10030293m.g
Citrus clementina
Ciclev10030293m.g
I
0.600
GSMUA_Achr4G30610_001
Musa acuminata
GSMUA_Achr4G30610_001
I
0.600
Solyc11g072770.1
Solanum lycopersicum
Solyc11g072770.1
I
0.600
orange1.1g039144m.g
Citrus sinensis
orange1.1g039144m.g
I
0.600