CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22019872m.g
(
Octopus bimaculoides
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Ocbimv22019872m.g
T227802_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22019871m.p
Homeodomain
336
407
KRERFTFREKHLEVLEAYFKENQYPSMELREEIAHLCNMALSSTGRELCEKEKVTPQIVSNWFNNRRKEMKK
Ocbimv22019872m.p
Homeodomain
342
413
KRERFTFREKHLEVLEAYFKENQYPSMELREEIAHLCNMALSSTGRELCEKEKVTPQIVSNWFNNRRKEMKK
Ocbimv22019873m.p
Homeodomain
338
409
KRERFTFREKHLEVLEAYFKENQYPSMELREEIAHLCNMALSSTGRELCEKEKVTPQIVSNWFNNRRKEMKK
Ocbimv22019874m.p
Homeodomain
332
403
KRERFTFREKHLEVLEAYFKENQYPSMELREEIAHLCNMALSSTGRELCEKEKVTPQIVSNWFNNRRKEMKK
Links
Other
Homeodomain
family TFs
Other
Octopus bimaculoides
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMAR013676
Strigamia maritima
SMAR013676
N
0.726
tetur01g03180
Tetranychus urticae
tetur01g03180
N
0.637