CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_8.11
(
Carica papaya
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
evm.TU.supercontig_8.11
T228572_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_8.11
Homeodomain
2
54
KRKTPLQLQTLEDFYTEENYPTQEAMQSYASALGLTSKQVRGWFIERRRRDKR
Links
Other
Homeodomain
family TFs
Other
Carica papaya
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30005.m001256
Ricinus communis
30005.m001256
N
0.767
orange1.1g001088m.g
Citrus sinensis
orange1.1g001088m.g
N
0.727
SapurV1A.0145s0250
Salix purpurea
SapurV1A.0145s0250
N
0.713
GPLIN_000275800
Globodera pallida
GPLIN_000275800
I
0.600