Pavir.Ca01677 (Panicum virgatum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pavir.Ca01677 T229227_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca01677.1.p Homeodomain 560 610
Pavir.Ca01677.2.p Homeodomain 560 610
Pavir.Ca01677.3.p Homeodomain 560 610

Links

Other Homeodomain family TFs
Other Panicum virgatum TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J08756 Panicum virgatum Pavir.J08756 N 0.846
GRMZM2G136369 Zea mays GRMZM2G136369 N 0.725
Si021365m.g Setaria italica Si021365m.g N 0.635
PDK_20s1754081g002 Phoenix dactylifera PDK_20s1754081g002 N 0.608