CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Contig6580.0.g110
(
Oxytricha trifallax
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Contig6580.0.g110
T229802_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Contig6580.0.g110
Homeodomain
248
304
NQKRLKKSQEEVQVLENEFLKNPAWDYQKKSELALKLNMTFNTVQKWNFDRMKKEQK
Links
Other
Homeodomain
family TFs
Other
Oxytricha trifallax
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Contig2250.0.g22
Oxytricha trifallax
Contig2250.0.g22
N
0.867
Contig4124.0.g49
Oxytricha trifallax
Contig4124.0.g49
N
0.867
Contig6836.0.g67
Oxytricha trifallax
Contig6836.0.g67
N
0.867
Contig1106.0.g3
Oxytricha trifallax
Contig1106.0.g3
N
0.860
Contig20340.0.g88
Oxytricha trifallax
Contig20340.0.g88
N
0.709