CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
EFA75019.1
(
Polysphondylium pallidum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
EFA75019.1
T229807_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hbx9
M02073_2.00
Dictyostelium discoideum
DWTGACAB
VTGTCAWH
PBM
Weirauch et al.(2014)
pTH6392
0.777
0.818
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFA75019.1
Homeodomain
481
538
KRKRGKLPGESTSILKSWLFEHNMHPYPTEDEKAMLANATSLSFSQINNWFTNARRRI
Links
Other
Homeodomain
family TFs
Other
Polysphondylium pallidum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.303.16.1
Dictyostelium purpureum
e_gw1.303.16.1
I
0.779
hbx9
Dictyostelium discoideum
DDB_G0280473
D
0.777