Scas_Contig642.20 (Saccharomyces castellii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Scas_Contig642.20 T230136_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTAL2_KLUDE
M02197_2.00 		Kluyveromyces delphensis
CRTGTAWW
WWTACAYG		 PBM
Weirauch et al.(2014)
pTH5974 		0.721 0.649
HMLALPHA2
M00915_2.00 		Saccharomyces cerevisiae
NNDACRHN
NDYGTHNN		 PBM
Gordan et al.(2011)
Hmlalpha2 		0.712 0.614
MATALPHA2
M01550_2.00 		Saccharomyces cerevisiae
NDNACAAT
ATTGTNHN		 PBM
Zhu et al.(2009)
Matalpha2 		0.712 0.614
MATALPHA2
M02189_2.00 		Saccharomyces cerevisiae
NNNDCDNN
NNHGHNNN		 PBM
Weirauch et al.(2014)
pTH6506 		0.712 0.614
HMRA2
M00055_2.00 		Saccharomyces cerevisiae
CRTGTAAW
WTTACAYG		 PBM
Badis et al.(2008)
HMRA2_2071 		0.712 0.614
HMRA2
M07484_2.00 		Saccharomyces cerevisiae
YRTGTAAW
WTTACAYR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0318.1 		0.712 0.614
MATALPHA2
M08570_2.00 		Saccharomyces cerevisiae
ACAYGH
DCRTGT		 Misc
DeBoer et al.(2011)
YCR039C_1364 		0.712 0.614
HMRA2
M08571_2.00 		Saccharomyces cerevisiae
YRTGTAAW
WTTACAYR		 Misc
DeBoer et al.(2011)
YCR096C_558 		0.712 0.614
MATALPHA2
M10791_2.00 		Saccharomyces cerevisiae
DWNNACAYGN
NCRTGTNNWH		 Transfac
Matys et al.(2006)
F$MATALPHA2_01 		0.712 0.614
MATALPHA2
M10792_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MATALPHA2_08 		0.712 0.614
MATALPHA2
M10793_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MATALPHA2P_Q4 		0.712 0.614
MATALPHA2
M10794_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MATALPHA2_Q4 		0.712 0.614
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig642.20 Homeodomain 131 190

Links

Other Homeodomain family TFs
Other Saccharomyces castellii TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCAS_0B09140 Naumovozyma castellii NCAS_0B09140 I 0.867
NDAI_0A00110 Naumovozyma dairenensis NDAI_0A00110 I 0.752
Kpol_2002p3 Vanderwaltozyma polyspora Kpol_2002p3 I 0.747
KAFR_0D00720 Kazachstania africana KAFR_0D00720 I 0.730
TDEL_0C07000 Torulaspora delbrueckii TDEL_0C07000 I 0.726
MTAL2_KLUDE Kluyveromyces delphensis MTAL2_KLUDE D 0.721
SKUD_178103 Saccharomyces kudriavzevii SKUD_178103 I 0.712
SKUD_204007 Saccharomyces kudriavzevii SKUD_204007 I 0.712
HMLALPHA2 Saccharomyces cerevisiae YCL067C D 0.712
MATALPHA2 Saccharomyces cerevisiae YCR039C D 0.712
HMRA2 Saccharomyces cerevisiae YCR096C D 0.712
2197_Multiple Saccharomyces paradoxus 2197_Multiple I 0.712
2266_Multiple Saccharomyces mikatae 2266_Multiple I 0.712
2269_Multiple Saccharomyces mikatae 2269_Multiple I 0.712
2281_YCR096C Saccharomyces mikatae 2281_YCR096C I 0.712
23789_YCR096C Saccharomyces paradoxus 23789_YCR096C I 0.712
2768_YCR039C Saccharomyces bayanus 2768_YCR039C I 0.712
2769_Multiple Saccharomyces paradoxus 2769_Multiple I 0.712
2986_YCR096C Saccharomyces bayanus 2986_YCR096C I 0.712
TPHA_0E03610 Tetrapisispora phaffii TPHA_0E03610 I 0.711
TPHA_0E04070 Tetrapisispora phaffii TPHA_0E04070 I 0.711
KNAG_0C00160 Kazachstania naganishii KNAG_0C00160 I 0.687
ZYRO0F15818g Zygosaccharomyces rouxii ZYRO0F15818g I 0.683
ZYRO0F18568g Zygosaccharomyces rouxii ZYRO0F18568g I 0.683