CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15025601
(
Schmidtea mediterranea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
SMU15025601
T230260_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15025601
Homeodomain
129
179
RKRRILFSQSQVYELERKFKHQKYLSASERDQLAQTINLTPNQNHRYKCKR
Links
Other
Homeodomain
family TFs
Other
Schmidtea mediterranea
TFs
100 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMU15038697
Schmidtea mediterranea
SMU15038697
I
0.754
nAv.1.0.1.g02987
Acanthocheilonema viteae
nAv.1.0.1.g02987
I
0.716
nAv.1.0.1.g03500
Acanthocheilonema viteae
nAv.1.0.1.g03500
I
0.716
nAv.1.0.1.g04155
Acanthocheilonema viteae
nAv.1.0.1.g04155
I
0.716
nAv.1.0.1.g09237
Acanthocheilonema viteae
nAv.1.0.1.g09237
I
0.716
EFV61260
Trichinella spiralis
EFV61260
I
0.712
KGM_11243
Danaus plexippus
KGM_11243
I
0.706
Minc14337
Meloidogyne incognita
Minc14337
I
0.706
maker-nMf.1.1.scaf01203-snap-gene-0.7
Meloidogyne floridensis
maker-nMf.1.1.scaf01203-snap-gene-0.7
I
0.706
SMU15028449
Schmidtea mediterranea
SMU15028449
I
0.705
HMEL006180
Heliconius melpomene
HMEL006180
I
0.702
MCINX004874
Melitaea cinxia
MCINX004874
I
0.702
TriadG9507
Trichoplax adhaerens
TriadG9507
I
0.698
BGIBMGA010704
Bombyx mori
BGIBMGA010704
I
0.695
SMU15001231
Schmidtea mediterranea
SMU15001231
I
0.693
CpipJ_CPIJ004108
Culex pipiens
CpipJ_CPIJ004108
I
0.688
AAEL006595
Aedes aegypti
AAEL006595
I
0.688
ADAC007060
Anopheles darlingi
ADAC007060
I
0.688
AGAP003670
Anopheles gambiae
AGAP003670
I
0.688
CPIJ004108
Culex quinquefasciatus
CPIJ004108
I
0.688
AARA010122
Anopheles arabiensis
AARA010122
I
0.688
AATE000358
Anopheles atroparvus
AATE000358
I
0.688
ACOM028768
Anopheles coluzzii
ACOM028768
I
0.688
ACUA002309
Anopheles culicifacies
ACUA002309
I
0.688
ADIR005346
Anopheles dirus
ADIR005346
I
0.688
AEPI001628
Anopheles epiroticus
AEPI001628
I
0.688
AFUN008965
Anopheles funestus
AFUN008965
I
0.688
AMAM013972
Anopheles maculatus
AMAM013972
I
0.688
AMEC022225
Anopheles melas
AMEC022225
I
0.688
AMIN004030
Anopheles minimus
AMIN004030
I
0.688
AQUA001539
Anopheles quadriannulatus
AQUA001539
I
0.688
ASIS004744
Anopheles sinensis
ASIS004744
I
0.688
ASTEI07436
Anopheles stephensi
ASTEI07436
I
0.688
SMAR005028
Strigamia maritima
SMAR005028
I
0.686
RPRC006183
Rhodnius prolixus
RPRC006183
I
0.671
HelroG74887
Helobdella robusta
HelroG74887
I
0.670
CpipJ_CPIJ007576
Culex pipiens
CpipJ_CPIJ007576
I
0.668
CPIJ007576
Culex quinquefasciatus
CPIJ007576
I
0.668
AAEL013760
Aedes aegypti
AAEL013760
I
0.666
AGAP011253
Anopheles gambiae
AGAP011253
I
0.666
AARA000173
Anopheles arabiensis
AARA000173
I
0.666
AATE013060
Anopheles atroparvus
AATE013060
I
0.666
ACHR005763
Anopheles christyi
ACHR005763
I
0.666
ACOM038092
Anopheles coluzzii
ACOM038092
I
0.666
ADIR002054
Anopheles dirus
ADIR002054
I
0.666
AEPI001330
Anopheles epiroticus
AEPI001330
I
0.666
AFAF013735
Anopheles farauti
AFAF013735
I
0.666
AFUN011052
Anopheles funestus
AFUN011052
I
0.666
AMAM006930
Anopheles maculatus
AMAM006930
I
0.666
AMEC014432
Anopheles melas
AMEC014432
I
0.666
AQUA000022
Anopheles quadriannulatus
AQUA000022
I
0.666
ASTEI06766
Anopheles stephensi
ASTEI06766
I
0.666
PHUM439860
Pediculus humanus
PHUM439860
I
0.665
ACUA001933
Anopheles culicifacies
ACUA001933
I
0.665
AMIN008343
Anopheles minimus
AMIN008343
I
0.665
ASIS013064
Anopheles sinensis
ASIS013064
I
0.665
Smp_186930
Schistosoma mansoni
Smp_186930
I
0.660
Sjc_0067990
Schistosoma japonicum
Sjc_0067990
I
0.660
SMRZ_0001509601
Schistosoma margrebowiei
SMRZ_0001509601
I
0.660
SROB_0000484201
Schistosoma rodhaini
SROB_0000484201
I
0.660
TRE_0000257401
Trichobilharzia regenti
TRE_0000257401
I
0.660
nkx2.2b
Danio rerio
ENSDARG00000101549
I
0.658
CapteG40416
Capitella teleta
CapteG40416
I
0.653
TriadG9561
Trichoplax adhaerens
TriadG9561
I
0.653
XP_002156512.1
Hydra magnipapillata
XP_002156512.1
I
0.653
HelroG82552
Helobdella robusta
HelroG82552
I
0.652
HelroG109698
Helobdella robusta
HelroG109698
I
0.651
HelroG148584
Helobdella robusta
HelroG148584
I
0.649
EmuJ_000733700
Echinococcus multilocularis
EmuJ_000733700
I
0.648
HDID_0000863701
Hymenolepis diminuta
HDID_0000863701
I
0.648
HNAJ_0000474501
Hymenolepis nana
HNAJ_0000474501
I
0.648
MCOS_0000203501
Mesocestoides corti
MCOS_0000203501
I
0.648
TASK_0000502501
Taenia asiatica
TASK_0000502501
I
0.648
TsM_000311100
Taenia solium
TsM_000311100
I
0.648
TTAC_0000848101
Hydatigera taeniaeformis
TTAC_0000848101
I
0.648
ECANG7_09053
Echinococcus canadensis
ECANG7_09053
I
0.645
TsM_001133000
Taenia solium
TsM_001133000
I
0.645
TTAC_0000148901
Hydatigera taeniaeformis
TTAC_0000148901
I
0.645
ECANG7_07702
Echinococcus canadensis
ECANG7_07702
I
0.644
NEMVEDRAFT_v1g127828
Nematostella vectensis
NEMVEDRAFT_v1g127828
I
0.643
LOAG_15141
Loa loa
LOAG_15141
I
0.642
TCLT_0000230101
Thelazia callipaeda
TCLT_0000230101
I
0.642
csin101526
Clonorchis sinensis
csin101526
I
0.640
D918_09349
Trichuris suis
D918_09349
I
0.640
TMUE_s0171001300
Trichuris muris
TMUE_s0171001300
I
0.640
NEMVEDRAFT_v1g48313
Nematostella vectensis
NEMVEDRAFT_v1g48313
I
0.637
EmuJ_000522100
Echinococcus multilocularis
EmuJ_000522100
I
0.635
TASK_0000819601
Taenia asiatica
TASK_0000819601
I
0.633
EmuJ_000533000
Echinococcus multilocularis
EmuJ_000533000
I
0.632
NEMVEDRAFT_v1g68616
Nematostella vectensis
NEMVEDRAFT_v1g68616
I
0.619
NEMVEDRAFT_v1g192469
Nematostella vectensis
NEMVEDRAFT_v1g192469
I
0.615
RSKR_0000979300
Rhabditophanes kr3021
RSKR_0000979300
I
0.613
EFV56477
Trichinella spiralis
EFV56477
I
0.605
CGI_10021129
Crassostrea gigas
CGI_10021129
I
0.599
estExt_fgenesh2_kg.C_1360002
Branchiostoma floridae
estExt_fgenesh2_kg.C_1360002
I
0.599
estExt_fgenesh2_pg.C_520073
Branchiostoma floridae
estExt_fgenesh2_pg.C_520073
I
0.599
D917_02281
Trichinella nativa
D917_02281
I
0.599
D918_08902
Trichuris suis
D918_08902
I
0.599
TMUE_s0005007200
Trichuris muris
TMUE_s0005007200
I
0.599
TTRE_0000127901
Trichuris trichiura
TTRE_0000127901
I
0.599