CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LjSGA_053368.1
(
Lotus japonicus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
LjSGA_053368.1
T230900_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_053368.1
Homeodomain
1
38
FNILVYPDEEQRYLSKKFDLKXKNVKFWFQNRRIQLKV
Links
Other
Homeodomain
family TFs
Other
Lotus japonicus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000222975
Malus domestica
MDP0000222975
N
0.672
ENSOARG00000004876
Ovis aries
ENSOARG00000004876
N
0.646
Brh_R008425
Buceros rhinoceros
Brh_R008425
N
0.646
ENSAPLG00000014320
Anas platyrhynchos
ENSAPLG00000014320
N
0.638
ENSNLEG00000003291
Nomascus leucogenys
ENSNLEG00000003291
N
0.638
NKX3-2
Sorex araneus
ENSSARG00000011437
N
0.638
HPLM_0000614001
Haemonchus placei
HPLM_0000614001
N
0.635
L892_g8625
Steinernema scapterisci
L892_g8625
N
0.625
ANCDUO_22298
Ancylostoma duodenale
ANCDUO_22298
N
0.616
e_gw.260.61.1
Branchiostoma floridae
e_gw.260.61.1
N
0.612