CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACOC_0001052401
(
Angiostrongylus costaricensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
ACOC_0001052401
T232812_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACOC_0001052401-mRNA-1
Homeodomain
103
159
KKGRQTYQRYQTSVLEQKFQQSSYVSKKQREELRLQTNLTDRQIKIWFQNRRMKAKK
ACOC_0001052401-mRNA-1
Homeodomain
201
257
KRGRQTYTRQQTLELEKEFHYNKYLTRRRRIELNRSLGLSERQIKIWFQNRRMKQKK
Links
Other
Homeodomain
family TFs
Other
Angiostrongylus costaricensis
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DICVIV_05945
Dictyocaulus viviparus
DICVIV_05945
N
0.867
ALUE_0001788501
Ascaris lumbricoides
ALUE_0001788501
N
0.859
TCNE_0000591501
Toxocara canis
TCNE_0000591501
N
0.859
EVEC_0001360601
Enterobius vermicularis
EVEC_0001360601
N
0.858
WUBG_07821
Wuchereria bancrofti
WUBG_07821
N
0.853
WBGene00244668
Onchocerca volvulus
WBGene00244668
N
0.853
GPUH_0000069201
Gongylonema pulchrum
GPUH_0000069201
N
0.853
nOo.2.0.1.g09591
Onchocerca ochengi
nOo.2.0.1.g09591
N
0.853
hoxa6
Xenopus tropicalis
XB-GENE-481964
N
0.770
ENSLOCG00000006348
Lepisosteus oculatus
ENSLOCG00000006348
N
0.748
hoxc8
Oryzias latipes
ENSORLG00000007935
I
0.748
ENSTRUG00000003727
Takifugu rubripes
ENSTRUG00000003727
I
0.748
Ogr02752
Ophisaurus gracilis
Ogr02752
N
0.741
ENSLACG00000016556
Latimeria chalumnae
ENSLACG00000016556
N
0.612
ENSTRUG00000009707
Takifugu rubripes
ENSTRUG00000009707
I
0.606
ENSTRUG00000017521
Takifugu rubripes
ENSTRUG00000017521
I
0.602
ENSTRUG00000015941
Takifugu rubripes
ENSTRUG00000015941
I
0.601