CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
D917_04298
(
Trichinella nativa
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
D917_04298
T233493_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D917_04298
Homeodomain
83
134
RRNRTTFTTFQLHELERAFEKSHYPDVYTREALALKINLPEIRVQVRVENRQ
Links
Other
Homeodomain
family TFs
Other
Trichinella nativa
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSOARG00000005675
Ovis aries
ENSOARG00000005675
N
0.785
scaffold478-EXSNAP2012.13
Pristionchus exspectatus
scaffold478-EXSNAP2012.13
N
0.664
CGI_10020700
Crassostrea gigas
CGI_10020700
N
0.645
D918_05239
Trichuris suis
D918_05239
I
0.548
TTRE_0000684201
Trichuris trichiura
TTRE_0000684201
I
0.548