CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GPLIN_000698400
(
Globodera pallida
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
GPLIN_000698400
T234035_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000698400
Homeodomain
1
25
MAQKAQLPEKVIKHWFRNTLFKERQ
GPLIN_000698400
Homeodomain
388
444
RANRTRFTDFQLRTLQQFFDKQAYPKDDDLEMLSKKMGLSPRVIVVWFQNARQKARK
Links
Other
Homeodomain
family TFs
Other
Globodera pallida
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HPLM_0002137101
Haemonchus placei
HPLM_0002137101
N
0.821
BTMF_0000333901
Brugia timori
BTMF_0000333901
N
0.655
NBR_0000077301
Nippostrongylus brasiliensis
NBR_0000077301
N
0.635