CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_001107700
(
Globodera pallida
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
GPLIN_001107700
T234060_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_001107700
Homeodomain
241
297
RRHRTIFTQAQIDELESVFNGARYPDVPQREQLANKTELAEDRIQVWFQNRRAKWRK
GPLIN_001107700
Homeodomain
328
374
CADELESVFDGARYPDVPQREQLANKTELAEDRIQVWFQNRRAKWRK
Links
Other
Homeodomain
family TFs
Other
Globodera pallida
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Myotis_brandtii_Drgx_10007027
Myotis brandtii
Myotis_brandtii_Drgx_10007027
N
0.749
CapteG227181
Capitella teleta
CapteG227181
N
0.734
Sakowv30037738m.g
Saccoglossus kowalevskii
Sakowv30037738m.g
N
0.645
ASIM_0001150501
Anisakis simplex
ASIM_0001150501
N
0.604
ENSTRUG00000009707
Takifugu rubripes
ENSTRUG00000009707
I
0.601
ANCCAN_22461
Ancylostoma caninum
ANCCAN_22461
N
0.600