CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf01530-snap-gene-0.17
(
Meloidogyne floridensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
maker-nMf.1.1.scaf01530-snap-gene-0.17
T235025_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf01530-snap-gene-0.17-mRNA-1
Homeodomain
255
310
KRQRTAYTRNQVLELEKEFHFNKYLTRKRRIEIAHTLILTERQACKDMNRRMKHKK
Links
Other
Homeodomain
family TFs
Other
Meloidogyne floridensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc09570
Meloidogyne incognita
Minc09570
I
0.374