CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g39435
(
Romanomermis culicivorax
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
nRc.2.0.1.g39435
T235557_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t39435-RA
Homeodomain
192
239
KKARTTFSGRQIFELEKHFEIKKYLSSSERSELAKMLNVTETQVKIWV
Links
Other
Homeodomain
family TFs
Other
Romanomermis culicivorax
TFs
174 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MESCA000156
Megaselia scalaris
MESCA000156
I
0.770
MCINX009001
Melitaea cinxia
MCINX009001
N
0.751
ACYPI55918
Acyrthosiphon pisum
ACYPI55918
I
0.743
HMX1
Sus scrofa
ENSSSCG00000008720
I
0.738
nOo.2.0.1.g02038
Onchocerca ochengi
nOo.2.0.1.g02038
I
0.738
ISCW002094
Ixodes scapularis
ISCW002094
I
0.737
RPRC003712
Rhodnius prolixus
RPRC003712
I
0.737
LCUP012257
Lucilia cuprina
LCUP012257
I
0.737
CpipJ_CPIJ001077
Culex pipiens
CpipJ_CPIJ001077
I
0.733
CPIJ001077
Culex quinquefasciatus
CPIJ001077
I
0.733
HMEL004647
Heliconius melpomene
HMEL004647
I
0.733
L798_02155
Zootermopsis nevadensis
L798_02155
I
0.733
AARA011457
Anopheles arabiensis
AARA011457
I
0.733
ACUA001481
Anopheles culicifacies
ACUA001481
I
0.733
AFUN008465
Anopheles funestus
AFUN008465
I
0.733
AMEC008489
Anopheles melas
AMEC008489
I
0.733
ASIS009140
Anopheles sinensis
ASIS009140
I
0.733
CLEC013163
Cimex lectularius
CLEC013163
I
0.731
HHAL002696-PA
Halyomorpha halys
HHAL002696-PA
I
0.731
ENSOARG00000014943
Ovis aries
ENSOARG00000014943
I
0.720
fgenesh2_pg.scaffold_205000001
Branchiostoma floridae
fgenesh2_pg.scaffold_205000001
I
0.707
PEQ_0000511901
Parascaris equorum
PEQ_0000511901
I
0.707
SVUK_0001528201
Strongylus vulgaris
SVUK_0001528201
I
0.691
BTMF_0001012201
Brugia timori
BTMF_0001012201
I
0.689
nkx1.2la
Tetraodon nigroviridis
ENSTNIG00000013347
I
0.671
MCINX000151
Melitaea cinxia
MCINX000151
I
0.671
BGIBMGA008409
Bombyx mori
BGIBMGA008409
I
0.670
SPU_019366
Strongylocentrotus purpuratus
SPU_019366
I
0.668
MCINX003994
Melitaea cinxia
MCINX003994
I
0.667
Sjc_0024500
Schistosoma japonicum
Sjc_0024500
I
0.666
SCUD_0002260901
Schistosoma curassoni
SCUD_0002260901
I
0.664
SMTD_0002181901
Schistosoma mattheei
SMTD_0002181901
I
0.664
Brh_R005942
Buceros rhinoceros
Brh_R005942
I
0.663
SMTD_0001659701
Schistosoma mattheei
SMTD_0001659701
I
0.662
NEMVEDRAFT_v1g101730
Nematostella vectensis
NEMVEDRAFT_v1g101730
I
0.655
AMAM003654
Anopheles maculatus
AMAM003654
I
0.653
ENSPSIG00000008536
Pelodiscus sinensis
ENSPSIG00000008536
I
0.652
SNAPOd2T00015974001
Oikopleura dioica
SNAPOd2T00015974001
I
0.646
CJA32075
Caenorhabditis japonica
CJA32075
I
0.644
ENSACAG00000017916
Anolis carolinensis
ENSACAG00000017916
I
0.644
ENSCHOG00000011497
Choloepus hoffmanni
ENSCHOG00000011497
I
0.644
ENSCPOG00000006711
Cavia porcellus
ENSCPOG00000006711
I
0.644
EVX1
Dasypus novemcinctus
ENSDNOG00000005246
I
0.644
EVX2
Gallus gallus
ENSGALG00000020768
I
0.644
ENSNLEG00000005999
Nomascus leucogenys
ENSNLEG00000005999
I
0.644
ENSOARG00000000124
Ovis aries
ENSOARG00000000124
I
0.644
ENSOARG00000004347
Ovis aries
ENSOARG00000004347
I
0.644
ENSPSIG00000003143
Pelodiscus sinensis
ENSPSIG00000003143
I
0.644
ENSTSYG00000003728
Tarsius syrichta
ENSTSYG00000003728
I
0.644
ENSXMAG00000000423
Xiphophorus maculatus
ENSXMAG00000000423
I
0.644
LOAG_14821
Loa loa
LOAG_14821
I
0.644
Alligator_sinensis_CCG010654.1
Alligator sinensis
Alligator_sinensis_CCG010654.1
I
0.644
Cmyd_10010796
Chelonia mydas
Cmyd_10010796
I
0.644
Ogr14605
Ophisaurus gracilis
Ogr14605
I
0.644
Pvit_11713
Pogona vitticeps
Pvit_11713
I
0.644
DILT_0000495501
Diphyllobothrium latum
DILT_0000495501
I
0.644
HPBE_0000879501
Heligmosomoides bakeri
HPBE_0000879501
I
0.644
MCOS_0000529301
Mesocestoides corti
MCOS_0000529301
I
0.644
nRc.2.0.1.g34594
Romanomermis culicivorax
nRc.2.0.1.g34594
I
0.644
MhA1_Contig168.frz3.gene2
Meloidogyne hapla
MhA1_Contig168.frz3.gene2
I
0.643
HOXC4
Echinops telfairi
ENSETEG00000017258
I
0.642
Ocbimv22003301m.g
Octopus bimaculoides
Ocbimv22003301m.g
I
0.642
DILT_0001957901
Diphyllobothrium latum
DILT_0001957901
I
0.642
ECANG7_04683
Echinococcus canadensis
ECANG7_04683
I
0.642
EmuJ_000791300
Echinococcus multilocularis
EmuJ_000791300
I
0.642
MhA1_Contig168.frz3.gene54
Meloidogyne hapla
MhA1_Contig168.frz3.gene54
I
0.642
SNAPOd2T00015976001
Oikopleura dioica
SNAPOd2T00015976001
I
0.641
ANCCEY_05900
Ancylostoma ceylanicum
ANCCEY_05900
I
0.641
RSKR_0001035725
Rhabditophanes kr3021
RSKR_0001035725
I
0.641
Hsal_06667--XP_001121341.1_APIME
Harpegnathos saltator
Hsal_06667--XP_001121341.1_APIME
I
0.640
nRc.2.0.1.g25699
Romanomermis culicivorax
nRc.2.0.1.g25699
I
0.640
SPU_023868
Strongylocentrotus purpuratus
SPU_023868
I
0.639
Sjc_0117050
Schistosoma japonicum
Sjc_0117050
I
0.639
A_01582
Schistosoma haematobium
A_01582
I
0.639
SCUD_0001109901
Schistosoma curassoni
SCUD_0001109901
I
0.639
SMRZ_0000244901
Schistosoma margrebowiei
SMRZ_0000244901
I
0.639
SMTD_0001424801
Schistosoma mattheei
SMTD_0001424801
I
0.639
SROB_0000320701
Schistosoma rodhaini
SROB_0000320701
I
0.639
D915_01024
Fasciola hepatica
D915_01024
I
0.638
T265_14910
Opisthorchis viverrini
T265_14910
I
0.638
OTP
Bos taurus
ENSBTAG00000009249
I
0.637
ENSOARG00000017074
Ovis aries
ENSOARG00000017074
I
0.637
HelroG67489
Helobdella robusta
HelroG67489
I
0.637
Afo_R008309
Aptenodytes forsteri
Afo_R008309
I
0.637
Brh_R009027
Buceros rhinoceros
Brh_R009027
I
0.637
ENSBTAP00000048189-D1
Bos grunniens
ENSBTAP00000048189-D1
I
0.637
Tal_R010888
Tyto alba
Tal_R010888
I
0.637
PXEA_0003184101
Protopolystoma xenopodis
PXEA_0003184101
I
0.637
Sjc_0012410
Schistosoma japonicum
Sjc_0012410
I
0.633
SMRZ_0002144101
Schistosoma margrebowiei
SMRZ_0002144101
I
0.633
TRE_0001489001
Trichobilharzia regenti
TRE_0001489001
I
0.633
ACHR008110
Anopheles christyi
ACHR008110
I
0.632
AFUN009620
Anopheles funestus
AFUN009620
I
0.632
ENSMICG00000011284
Microcebus murinus
ENSMICG00000011284
I
0.630
ASU_12993
Ascaris suum
ASU_12993
I
0.629
PXEA_0002573101
Protopolystoma xenopodis
PXEA_0002573101
I
0.629
TTAC_0000586501
Hydatigera taeniaeformis
TTAC_0000586501
I
0.629
ENSETEG00000006944
Echinops telfairi
ENSETEG00000006944
I
0.625
YQE_12573
Dendroctonus ponderosae
YQE_12573
I
0.624
HDID_0000471501
Hymenolepis diminuta
HDID_0000471501
I
0.624
HNAJ_0000718601
Hymenolepis nana
HNAJ_0000718601
I
0.624
SSLN_0000234601
Schistocephalus solidus
SSLN_0000234601
I
0.624
TASK_0000693901
Taenia asiatica
TASK_0000693901
I
0.624
TTAC_0001116101
Hydatigera taeniaeformis
TTAC_0001116101
I
0.624
LCUP013886
Lucilia cuprina
LCUP013886
I
0.623
Bm7931
Brugia malayi
Bm7931
I
0.622
ENSAPLG00000001397
Anas platyrhynchos
ENSAPLG00000001397
N
0.622
SPER_0003668801
Spirometra erinaceieuropaei
SPER_0003668801
I
0.622
EFV57464
Trichinella spiralis
EFV57464
I
0.621
D917_01205
Trichinella nativa
D917_01205
I
0.621
nRc.2.0.1.g08520
Romanomermis culicivorax
nRc.2.0.1.g08520
I
0.621
BN7_1723
Wickerhamomyces ciferrii
BN7_1723
N
0.619
CGI_10025814
Crassostrea gigas
CGI_10025814
I
0.618
ENSPSIG00000007408
Pelodiscus sinensis
ENSPSIG00000007408
I
0.618
Sjc_0110780
Schistosoma japonicum
Sjc_0110780
I
0.618
ACOM030702
Anopheles coluzzii
ACOM030702
I
0.618
PPAI005477
Phlebotomus papatasi
PPAI005477
I
0.618
MCINX001506
Melitaea cinxia
MCINX001506
I
0.617
AFAF012092
Anopheles farauti
AFAF012092
I
0.617
nRc.2.0.1.g22686
Romanomermis culicivorax
nRc.2.0.1.g22686
I
0.616
nRc.2.0.1.g34697
Romanomermis culicivorax
nRc.2.0.1.g34697
I
0.616
nRc.2.0.1.g21422
Romanomermis culicivorax
nRc.2.0.1.g21422
I
0.615
BGIBMGA010750
Bombyx mori
BGIBMGA010750
I
0.614
LDEC001243
Leptinotarsa decemlineata
LDEC001243
I
0.614
Minc11454
Meloidogyne incognita
Minc11454
I
0.614
DICVIV_02146
Dictyocaulus viviparus
DICVIV_02146
I
0.614
Ppa-lim-4
Pristionchus pacificus
PPA17744
I
0.613
D918_00934
Trichuris suis
D918_00934
I
0.612
HESX1
Echinops telfairi
ENSETEG00000013962
I
0.611
ENSMEUG00000014585
Macropus eugenii
ENSMEUG00000014585
I
0.611
ENSTSYG00000000121
Tarsius syrichta
ENSTSYG00000000121
I
0.611
nRc.2.0.1.g34413
Romanomermis culicivorax
nRc.2.0.1.g34413
I
0.611
ENSOANG00000001698
Ornithorhynchus anatinus
ENSOANG00000001698
I
0.610
ENSTBEG00000005238
Tupaia belangeri
ENSTBEG00000005238
I
0.610
ENSTSYG00000010539
Tarsius syrichta
ENSTSYG00000010539
I
0.610
KGM_17907
Danaus plexippus
KGM_17907
I
0.610
nOo.2.0.1.g04757
Onchocerca ochengi
nOo.2.0.1.g04757
I
0.610
TsM_001125800
Taenia solium
TsM_001125800
I
0.610
Ogr16650
Ophisaurus gracilis
Ogr16650
I
0.609
AMIN005749
Anopheles minimus
AMIN005749
I
0.609
BGLB011570
Biomphalaria glabrata
BGLB011570
I
0.609
A_02749
Schistosoma haematobium
A_02749
I
0.608
ACAC_0000020101
Angiostrongylus cantonensis
ACAC_0000020101
I
0.608
ANCCAN_23190
Ancylostoma caninum
ANCCAN_23190
I
0.608
L889_g14399
Steinernema feltiae
L889_g14399
I
0.608
NBR_0002231201
Nippostrongylus brasiliensis
NBR_0002231201
I
0.608
ENSFCAG00000006890
Felis catus
ENSFCAG00000006890
I
0.607
SBAD_0000184901
Soboliphyme baturini
SBAD_0000184901
I
0.607
TRE_0001429201
Trichobilharzia regenti
TRE_0001429201
I
0.607
ENSACAG00000004933
Anolis carolinensis
ENSACAG00000004933
I
0.606
ENSMICG00000002512
Microcebus murinus
ENSMICG00000002512
I
0.606
ISCW005966
Ixodes scapularis
ISCW005966
I
0.606
Ppa-tab-1
Pristionchus pacificus
PPA28228
I
0.606
PXEA_0000761101
Protopolystoma xenopodis
PXEA_0000761101
I
0.606
ENSAPLG00000007956
Anas platyrhynchos
ENSAPLG00000007956
I
0.605
DILT_0000834901
Diphyllobothrium latum
DILT_0000834901
I
0.605
HMEL004093
Heliconius melpomene
HMEL004093
I
0.604
MCINX003555
Melitaea cinxia
MCINX003555
I
0.604
SINV17239
Solenopsis invicta
SINV17239
I
0.604
nOo.2.0.1.g07375
Onchocerca ochengi
nOo.2.0.1.g07375
I
0.604
ACEP27603
Atta cephalotes
ACEP27603
I
0.603
CJA03710
Caenorhabditis japonica
CJA03710
I
0.603
Ocbimv22018651m.g
Octopus bimaculoides
Ocbimv22018651m.g
I
0.603
Sakowv30011703m.g
Saccoglossus kowalevskii
Sakowv30011703m.g
I
0.603
HHAL010266-PA
Halyomorpha halys
HHAL010266-PA
I
0.603
AQUA005938
Anopheles quadriannulatus
AQUA005938
I
0.603
AMAM016923
Anopheles maculatus
AMAM016923
I
0.602
LotgiG56601
Lottia gigantea
LotgiG56601
I
0.601
maker-nMf.1.1.scaf26066-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf26066-augustus-gene-0.3
I
0.601
TRE_0000847901
Trichobilharzia regenti
TRE_0000847901
I
0.600
ISCW001025
Ixodes scapularis
ISCW001025
I
0.599
Sakowv30004430m.g
Saccoglossus kowalevskii
Sakowv30004430m.g
I
0.599
ADIR004093
Anopheles dirus
ADIR004093
I
0.599
PPAI007454
Phlebotomus papatasi
PPAI007454
I
0.599