TsM_000169700 (Taenia solium)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 TsM_000169700 T237036_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hoxa1
M00450_2.00 		Mus musculus
NHRATKRNN
NNYMATYDN		 PBM
Berger et al.(2008)
Hoxa1_3425 		0.652 0.719
HOXA1
M03096_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
HOXA1_1 		0.652 0.719
HOXA1
M04959_2.00 		Homo sapiens
NTMATKAN
NTMATKAN		 SELEX
Yin et al.(2017)
HOXA1_FL_HT-SELEX 		0.652 0.719
HOXA1
M09133_2.00 		Homo sapiens
NKGATGGATG
CATCCATCMN		 Misc
Kulakovskiy et al.(2013)
HXA1_HUMAN.H11MO.0.C 		0.652 0.719
Hoxa1
M09196_2.00 		Mus musculus
NKGATGGATG
CATCCATCMN		 Misc
Kulakovskiy et al.(2013)
HXA1_MOUSE.H11MO.0.C 		0.652 0.719
HOXA1
M04960_2.00 		Homo sapiens
NTMATKAN
NTMATKAN		 SELEX
Yin et al.(2017)
HOXA1_FL_Methyl-HT-SELEX_1 		0.652 0.719
HOXA1
M04961_2.00 		Homo sapiens
NTAAYGAB
VTCRTTAN		 SELEX
Yin et al.(2017)
HOXA1_FL_Methyl-HT-SELEX_2 		0.652 0.719
lab
M03797_2.00 		Drosophila melanogaster
NTAATTAS
STAATTAN		 SELEX
Nitta et al.(2015)
lab_1 		0.616 0.684
lab
M06493_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Mathelier et al.(2014)
MA0230.1 		0.616 0.684
lab
M06260_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Zhu et al.(2011)
Lab_Cell_FBgn0002522 		0.616 0.684
lab
M06261_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Zhu et al.(2011)
Lab_SOLEXA_FBgn0002522 		0.616 0.684
Hoxd1
M00492_2.00 		Mus musculus
NRATNDNN
NNHNATYN		 PBM
Berger et al.(2008)
Hoxd1_3448 		0.600 0.684
HOXD1
M05098_2.00 		Homo sapiens
BTAATTAV
BTAATTAV		 SELEX
Yin et al.(2017)
HOXD1_eDBD_HT-SELEX 		0.600 0.684
Hoxd1
M10768_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXD1_03 		0.600 0.684
HOXD1
M05099_2.00 		Homo sapiens
BTAATKAV
BTMATTAV		 SELEX
Yin et al.(2017)
HOXD1_eDBD_Methyl-HT-SELEX_1 		0.600 0.684
HOXD1
M05100_2.00 		Homo sapiens
NTWAYGAB
VTCRTWAN		 SELEX
Yin et al.(2017)
HOXD1_eDBD_Methyl-HT-SELEX_2 		0.600 0.684
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TsM_000169700 Homeodomain 73 129

Links

Other Homeodomain family TFs
Other Taenia solium TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ECANG7_00712 Echinococcus canadensis ECANG7_00712 I 0.858
EmuJ_000421450 Echinococcus multilocularis EmuJ_000421450 I 0.858
TASK_0000403901 Taenia asiatica TASK_0000403901 I 0.834
HDID_0000907601 Hymenolepis diminuta HDID_0000907601 N 0.737
HNAJ_0000737701 Hymenolepis nana HNAJ_0000737701 N 0.737
ENSONIG00000012243 Oreochromis niloticus ENSONIG00000012243 I 0.725
csin108972 Clonorchis sinensis csin108972 I 0.724
T265_00495 Opisthorchis viverrini T265_00495 I 0.724
MCOS_0000875101 Mesocestoides corti MCOS_0000875101 I 0.679
HOXA1 Pteropus vampyrus ENSPVAG00000002476 I 0.665
ENSAMEG00000005924 Ailuropoda melanoleuca ENSAMEG00000005924 I 0.652
HOXA1 Bos taurus ENSBTAG00000013263 I 0.652
HOXA1 Canis familiaris ENSCAFG00000002936 I 0.652
HOXA1 Callithrix jacchus ENSCJAG00000008024 I 0.652
ENSCPOG00000013500 Cavia porcellus ENSCPOG00000013500 I 0.652
ENSCSAG00000014256 Chlorocebus sabaeus ENSCSAG00000014256 I 0.652
Hoxa1 Dipodomys ordii ENSDORG00000006311 I 0.652
HOXA1 Equus caballus ENSECAG00000021767 I 0.652
HOXA1 Felis catus ENSFCAG00000007937 I 0.652
HOXA1 Homo sapiens ENSG00000105991 D 0.652
HOXB1 Gasterosteus aculeatus ENSGACG00000005635 I 0.652
HOXA1 Gorilla gorilla ENSGGOG00000002209 I 0.652
HOXA1 Loxodonta africana ENSLAFG00000001615 I 0.652
ENSMICG00000000471 Microcebus murinus ENSMICG00000000471 I 0.652
HOXA1 Myotis lucifugus ENSMLUG00000014496 I 0.652
HOXA1 Macaca mulatta ENSMMUG00000012807 I 0.652
ENSMPUG00000004711 Mustela putorius furo ENSMPUG00000004711 I 0.652
Hoxa1 Mus musculus ENSMUSG00000029844 D 0.652
ENSOARG00000009850 Ovis aries ENSOARG00000009850 I 0.652
HOXA1 Otolemur garnettii ENSOGAG00000012370 I 0.652
HOXA1 Ochotona princeps ENSOPRG00000010385 I 0.652
ENSPANG00000003403 Papio anubis ENSPANG00000003403 I 0.652
ENSPFOG00000002038 Poecilia formosa ENSPFOG00000002038 I 0.652
ENSPPYG00000029903 Pongo abelii ENSPPYG00000029903 I 0.652
HOXA1 Pan troglodytes ENSPTRG00000019010 I 0.652
Hoxa1 Rattus norvegicus ENSRNOG00000005628 I 0.652
NEWGENE_2812 Rattus norvegicus ENSRNOG00000058485 I 0.652
HOXA1 Sus scrofa ENSSSCG00000016707 I 0.652
ENSSTOG00000024209 Ictidomys tridecemlineatus ENSSTOG00000024209 I 0.652
HOXA1 Tupaia belangeri ENSTBEG00000010467 I 0.652
HOXA1 Tursiops truncatus ENSTTRG00000006761 I 0.652
ENSBTAP00000001367-D1 Bos grunniens ENSBTAP00000001367-D1 I 0.652
ENSP00000343246 Macaca fascicularis ENSP00000343246 I 0.652
Myotis_brandtii_HOXA1_10034040 Myotis brandtii Myotis_brandtii_HOXA1_10034040 I 0.652
LOAG_16680 Loa loa LOAG_16680 I 0.639
ENSPSIG00000007311 Pelodiscus sinensis ENSPSIG00000007311 I 0.633
ENSLOCG00000006423 Lepisosteus oculatus ENSLOCG00000006423 I 0.629
ENSSHAG00000008509 Sarcophilus harrisii ENSSHAG00000008509 I 0.625
HOXB1 Anolis carolinensis ENSACAG00000006529 I 0.621
HOXA1 Dasypus novemcinctus ENSDNOG00000047948 I 0.621
HOXB1 Ornithorhynchus anatinus ENSOANG00000010307 I 0.621
HOXB1 Oryzias latipes ENSORLG00000017053 I 0.621
HOXB1 Tetraodon nigroviridis ENSTNIG00000003341 I 0.621
HOXB1 Takifugu rubripes ENSTRUG00000010036 I 0.621
Cmyd_10015821 Chelonia mydas Cmyd_10015821 I 0.621
DAPPUDRAFT_347216 Daphnia pulex DAPPUDRAFT_347216 I 0.620
HOXA1 Anolis carolinensis ENSACAG00000010967 I 0.620
ENSAMXG00000005258 Astyanax mexicanus ENSAMXG00000005258 I 0.620
ENSAMXG00000016043 Astyanax mexicanus ENSAMXG00000016043 I 0.620
ENSAPLG00000013693 Anas platyrhynchos ENSAPLG00000013693 I 0.620
hox1 Ciona intestinalis ENSCING00000001273 I 0.620
hoxb1a Danio rerio ENSDARG00000008174 I 0.620
hoxa1a Danio rerio ENSDARG00000104307 I 0.620
HOXA1 Erinaceus europaeus ENSEEUG00000001144 I 0.620
ENSFALG00000009490 Ficedula albicollis ENSFALG00000009490 I 0.620
hoxa1a Gasterosteus aculeatus ENSGACG00000007085 I 0.620
HOXB1 Gallus gallus ENSGALG00000013454 I 0.620
HOXA1 Gallus gallus ENSGALG00000028095 I 0.620
ENSGMOG00000013820 Gadus morhua ENSGMOG00000013820 I 0.620
ENSLACG00000008144 Latimeria chalumnae ENSLACG00000008144 I 0.620
ENSLACG00000014698 Latimeria chalumnae ENSLACG00000014698 I 0.620
ENSLACG00000017232 Latimeria chalumnae ENSLACG00000017232 I 0.620
ENSLOCG00000011798 Lepisosteus oculatus ENSLOCG00000011798 I 0.620
ENSLOCG00000013432 Lepisosteus oculatus ENSLOCG00000013432 I 0.620
ENSMEUG00000012576 Macropus eugenii ENSMEUG00000012576 I 0.620
HOXB1 Meleagris gallopavo ENSMGAG00000002567 I 0.620
HOXA1 Monodelphis domestica ENSMODG00000000507 I 0.620
ENSOANG00000009163 Ornithorhynchus anatinus ENSOANG00000009163 I 0.620
HOXA1 Oryctolagus cuniculus ENSOCUG00000015215 I 0.620
ENSONIG00000004591 Oreochromis niloticus ENSONIG00000004591 I 0.620
hoxa1a Oryzias latipes ENSORLG00000004981 I 0.620
ENSPFOG00000002670 Poecilia formosa ENSPFOG00000002670 I 0.620
ENSPSIG00000002734 Pelodiscus sinensis ENSPSIG00000002734 I 0.620
ENSSHAG00000016818 Sarcophilus harrisii ENSSHAG00000016818 I 0.620
ENSTGUG00000002898 Taeniopygia guttata ENSTGUG00000002898 I 0.620
hoxa1a Tetraodon nigroviridis ENSTNIG00000000977 I 0.620
hoxa1a Takifugu rubripes ENSTRUG00000015937 I 0.620
Aan_R001084 Calypte anna Aan_R001084 I 0.620
Aan_R012461 Calypte anna Aan_R012461 I 0.620
Afo_R003424 Aptenodytes forsteri Afo_R003424 I 0.620
Afo_R006600 Aptenodytes forsteri Afo_R006600 I 0.620
Alligator_sinensis_CCG010195.1 Alligator sinensis Alligator_sinensis_CCG010195.1 I 0.620
Alligator_sinensis_CCG014467.1 Alligator sinensis Alligator_sinensis_CCG014467.1 I 0.620
Ogr12581 Ophisaurus gracilis Ogr12581 I 0.620
Ogr16309 Ophisaurus gracilis Ogr16309 I 0.620
Pvit_02714 Pogona vitticeps Pvit_02714 I 0.620
Tal_R004011 Tyto alba Tal_R004011 I 0.620
hoxa1 Xenopus tropicalis XB-GENE-480737 I 0.620
hoxa1.L Xenopus laevis XB-GENE-480741 I 0.620
hoxb1 Xenopus tropicalis XB-GENE-485772 I 0.620
hoxa1.S Xenopus laevis XB-GENE-6252179 I 0.620
ENSPFOG00000020405 Poecilia formosa ENSPFOG00000020405 I 0.619
LotgiG100648 Lottia gigantea LotgiG100648 I 0.618
SPU_017352 Strongylocentrotus purpuratus SPU_017352 I 0.618
tetur11g05940 Tetranychus urticae tetur11g05940 I 0.617
ACEP10439 Atta cephalotes ACEP10439 I 0.616
ACYPI21373 Acyrthosiphon pisum ACYPI21373 I 0.616
BGIBMGA014283 Bombyx mori BGIBMGA014283 I 0.616
BGIBMGA014479 Bombyx mori BGIBMGA014479 I 0.616
ENSPFOG00000018156 Poecilia formosa ENSPFOG00000018156 I 0.616
HOXB1 Tetraodon nigroviridis ENSTNIG00000010094 I 0.616
ENSXMAG00000013730 Xiphophorus maculatus ENSXMAG00000013730 I 0.616
lab Drosophila melanogaster FBgn0002522 D 0.616
lab Drosophila pseudoobscura FBgn0012727 I 0.616
lab Drosophila virilis FBgn0045508 I 0.616
GF17803 Drosophila ananassae FBgn0094821 I 0.616
GG10324 Drosophila erecta FBgn0102633 I 0.616
GH19490 Drosophila grimshawi FBgn0126955 I 0.616
GI23760 Drosophila mojavensis FBgn0146485 I 0.616
GL22053 Drosophila persimilis FBgn0159645 I 0.616
GM10536 Drosophila sechellia FBgn0165482 I 0.616
GD19533 Drosophila simulans FBgn0191028 I 0.616
GK10836 Drosophila willistoni FBgn0212847 I 0.616
GE25839 Drosophila yakuba FBgn0242889 I 0.616
GB51303 Apis mellifera GB51303 I 0.616
HMEL015573 Heliconius melpomene HMEL015573 I 0.616
KGM_10843 Danaus plexippus KGM_10843 I 0.616
L798_06192 Zootermopsis nevadensis L798_06192 I 0.616
MCINX014881 Melitaea cinxia MCINX014881 I 0.616
NV15149 Nasonia vitripennis NV15149 I 0.616
PHUM267120 Pediculus humanus PHUM267120 I 0.616
RPRC000004 Rhodnius prolixus RPRC000004 I 0.616
SINV20731 Solenopsis invicta SINV20731 I 0.616
TC000926 Tribolium castaneum TC000926 I 0.616
YQE_04655 Dendroctonus ponderosae YQE_04655 I 0.616
YQE_09517 Dendroctonus ponderosae YQE_09517 I 0.616
Cflo_10727--XP_001120278.1_APIME Camponotus floridanus Cflo_10727--XP_001120278.1_APIME I 0.616
CLEC001691 Cimex lectularius CLEC001691 I 0.616
LCUP000233 Lucilia cuprina LCUP000233 I 0.616
LDEC000905 Leptinotarsa decemlineata LDEC000905 I 0.616
MDOA005309 Musca domestica MDOA005309 I 0.616
PPAI006704 Phlebotomus papatasi PPAI006704 I 0.616
estExt_fgenesh2_kg.C_4020003 Branchiostoma floridae estExt_fgenesh2_kg.C_4020003 I 0.615
Gfo_R015844 Geospiza fortis Gfo_R015844 I 0.612
SPER_0002997001 Spirometra erinaceieuropaei SPER_0002997001 I 0.609
Bm5377 Brugia malayi Bm5377 I 0.607
WBGene00244661 Onchocerca volvulus WBGene00244661 I 0.607
nAv.1.0.1.g07020 Acanthocheilonema viteae nAv.1.0.1.g07020 I 0.607
SPER_0001880401 Spirometra erinaceieuropaei SPER_0001880401 I 0.604
SPER_0003105501 Spirometra erinaceieuropaei SPER_0003105501 I 0.604
SSLN_0001304301 Schistocephalus solidus SSLN_0001304301 I 0.604
ENSACAG00000006543 Anolis carolinensis ENSACAG00000006543 I 0.601
ENSAMEG00000001828 Ailuropoda melanoleuca ENSAMEG00000001828 I 0.600
HOXD1 Bos taurus ENSBTAG00000015840 I 0.600
HOXD1 Canis familiaris ENSCAFG00000031345 I 0.600
HOXD1 Choloepus hoffmanni ENSCHOG00000004405 I 0.600
HOXD1 Callithrix jacchus ENSCJAG00000008290 I 0.600
HOXD1 Cavia porcellus ENSCPOG00000005509 I 0.600
ENSCSAG00000014419 Chlorocebus sabaeus ENSCSAG00000014419 I 0.600
HOXD1 Dasypus novemcinctus ENSDNOG00000019807 I 0.600
Hoxd1 Dipodomys ordii ENSDORG00000009445 I 0.600
ENSECAG00000022454 Equus caballus ENSECAG00000022454 I 0.600
HOXD1 Homo sapiens ENSG00000128645 D 0.600
HOXD1 Gorilla gorilla ENSGGOG00000001348 I 0.600
HOXD3 Loxodonta africana ENSLAFG00000005477 I 0.600
ENSMICG00000004292 Microcebus murinus ENSMICG00000004292 I 0.600
ENSMLUG00000029447 Myotis lucifugus ENSMLUG00000029447 I 0.600
ENSMMUG00000022276 Macaca mulatta ENSMMUG00000022276 I 0.600
ENSMPUG00000014084 Mustela putorius furo ENSMPUG00000014084 I 0.600
Hoxd1 Mus musculus ENSMUSG00000042448 D 0.600
ENSNLEG00000006019 Nomascus leucogenys ENSNLEG00000006019 I 0.600
ENSOARG00000017462 Ovis aries ENSOARG00000017462 I 0.600
HOXD1 Otolemur garnettii ENSOGAG00000015712 I 0.600
HOXD1 Ochotona princeps ENSOPRG00000004116 I 0.600
ENSPANG00000009593 Papio anubis ENSPANG00000009593 I 0.600
ENSPPYG00000012964 Pongo abelii ENSPPYG00000012964 I 0.600
HOXD1 Pan troglodytes ENSPTRG00000012673 I 0.600
Hoxd1 Rattus norvegicus ENSRNOG00000001572 I 0.600
HOXD1 Sus scrofa ENSSSCG00000015986 I 0.600
ENSSTOG00000012230 Ictidomys tridecemlineatus ENSSTOG00000012230 I 0.600
HOXD1 Tursiops truncatus ENSTTRG00000002522 I 0.600
ENSBTAP00000021043-D1 Bos grunniens ENSBTAP00000021043-D1 I 0.600
ENSP00000328598 Macaca fascicularis ENSP00000328598 I 0.600
DILT_0001274301 Diphyllobothrium latum DILT_0001274301 I 0.599
SSLN_0000307401 Schistocephalus solidus SSLN_0000307401 I 0.599