CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GH24002
(
Drosophila grimshawi
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
FBgn0131459
T237570_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ey
M03896_2.00
Drosophila melanogaster
CKAATTAD
HTAATTMG
SELEX
Nitta et al.(2015)
ey_1
0.706
0.706
ey
M03897_2.00
Drosophila melanogaster
HTAATCKMATTAD
HTAATKMGATTAD
SELEX
Nitta et al.(2015)
ey_2
0.706
0.706
ey
M03898_2.00
Drosophila melanogaster
WAAYYRRTTN
NAAYYRRTTW
SELEX
Nitta et al.(2015)
ey_3
0.706
0.706
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0157908
Paired box
100
222
CHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRDEMVAEYRFERNFTVRISSKREWTTLDKVHPLKPHTIKWYTDRSLTNHGTGLGDVGPRVSSINRVLR
FBpp0157908
Homeodomain
497
553
QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRR
Links
Other
Homeodomain,Paired box
family TFs
Other
Drosophila grimshawi
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ey
Drosophila persimilis
FBgn0043659
I
0.717
GI14081
Drosophila mojavensis
FBgn0136835
I
0.717
GK13702
Drosophila willistoni
FBgn0215710
I
0.717
ey
Drosophila pseudoobscura
FBgn0018538
I
0.717
GE14559
Drosophila yakuba
FBgn0232158
I
0.711
ACYPI067710
Acyrthosiphon pisum
ACYPI067710
I
0.711
GG16399
Drosophila erecta
FBgn0108631
I
0.711
ey
Drosophila virilis
FBgn0028754
I
0.711
ey
Drosophila melanogaster
FBgn0005558
D
0.711
ey
Drosophila sechellia
FBgn0068720
I
0.711
NV15820
Nasonia vitripennis
NV15820
I
0.706
GB50342
Apis mellifera
GB50342
I
0.706
GF22818
Drosophila ananassae
FBgn0099812
I
0.703
L798_11483
Zootermopsis nevadensis
L798_11483
I
0.702
TC008176
Tribolium castaneum
TC008176
I
0.700