Myotis_brandtii_Pax6_10028754 (Myotis brandtii)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00292 (PAX) 		IPR001356
IPR001523 		Myotis_brandtii_Pax6_10028754 T237722_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX6
M00342_2.00 		Homo sapiens
NNNRCDMATTANNN
NNNTAATKHGYNNN		 PBM
Barrera et al.(2016)
PAX6_REF 		0.702 0.702
Pax6
M00540_2.00 		Mus musculus
CBAATTAA
TTAATTVG		 PBM
Berger et al.(2008)
Pax6_3838 		0.702 0.702
PAX6
M03291_2.00 		Homo sapiens
DTWYACGCWTGANTGMDYH
DRHKCANTCAWGCGTRWAH		 SELEX
Jolma et al.(2013)
PAX6_1 		0.702 0.702
PAX6
M05412_2.00 		Homo sapiens
NYACGCHYSRNYRMNYN
NRNKYRNYSRDGCGTRN		 SELEX
Yin et al.(2017)
PAX6_eDBD_HT-SELEX 		0.702 0.702
PAX6
M05414_2.00 		Homo sapiens
NYRCGCNYSRNYRVNYN
NRNBYRNYSRNGCGYRN		 SELEX
Yin et al.(2017)
PAX6_FL_HT-SELEX 		0.702 0.702
PAX6
M02689_2.00 		Homo sapiens
TTYACGCWTSANTK
MANTSAWGCGTRAA		 SELEX
Mathelier et al.(2014)
MA0069.1 		0.702 0.702
PAX6
M09216_2.00 		Homo sapiens
TYMYRCWTSRNT
ANYSAWGYRKRA		 Misc
Kulakovskiy et al.(2013)
PAX6_HUMAN.H11MO.0.C 		0.702 0.702
Pax6
M09217_2.00 		Mus musculus
TYMYRCWTSRNT
ANYSAWGYRKRA		 Misc
Kulakovskiy et al.(2013)
PAX6_MOUSE.H11MO.0.C 		0.702 0.702
PAX6
M10806_2.00 		Homo sapiens
NHNNTTYACGCWTSANTKVHH
DDBMANTSAWGCGTRAANNDN		 Transfac
Matys et al.(2006)
V$PAX6_01 		0.702 0.702
PAX6
M10807_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX6_Q2 		0.702 0.702
PAX6
M05413_2.00 		Homo sapiens
DYRCGCWTSRNYRMNYN
NRNKYRNYSAWGCGYRH		 SELEX
Yin et al.(2017)
PAX6_eDBD_Methyl-HT-SELEX 		0.702 0.702
PAX6
M05415_2.00 		Homo sapiens
NYACGCHYSRNYRMHYN
NRDKYRNYSRDGCGTRN		 SELEX
Yin et al.(2017)
PAX6_FL_Methyl-HT-SELEX 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_Pax6_10028754 Paired box 40 115
Myotis_brandtii_Pax6_10028754 Paired box 132 270
Myotis_brandtii_Pax6_10028754 Homeodomain 353 409

Links

Other Homeodomain,Paired box family TFs
Other Myotis brandtii TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSNLEG00000017888 Nomascus leucogenys ENSNLEG00000017888 I 0.705
PAX6 Felis catus ENSFCAG00000007094 I 0.705
PAX6 Gorilla gorilla ENSGGOG00000010246 I 0.705
PAX6 Loxodonta africana ENSLAFG00000015520 I 0.705
ENSPSIG00000012748 Pelodiscus sinensis ENSPSIG00000012748 I 0.705
Pax6 Rattus norvegicus ENSRNOG00000004410 I 0.705
ENSP00000368401-D1 Bos grunniens ENSP00000368401-D1 I 0.705
PAX6 Oryctolagus cuniculus ENSOCUG00000011075 I 0.705
ENSAMEG00000006908 Ailuropoda melanoleuca ENSAMEG00000006908 I 0.705
PAX6 Cavia porcellus ENSCPOG00000007245 I 0.705
ENSP00000368424 Macaca fascicularis ENSP00000368424 I 0.705
PAX6 Otolemur garnettii ENSOGAG00000007857 I 0.705
PAX6 Procavia capensis ENSPCAG00000005165 I 0.702
ENSPANG00000005448 Papio anubis ENSPANG00000005448 I 0.702
ENSSTOG00000003211 Ictidomys tridecemlineatus ENSSTOG00000003211 I 0.702
Pvit_09512 Pogona vitticeps Pvit_09512 I 0.702
pax6 Xenopus tropicalis XB-GENE-484088 I 0.702
Alligator_sinensis_CCG012954.1 Alligator sinensis Alligator_sinensis_CCG012954.1 I 0.702
PAX6 Tupaia belangeri ENSTBEG00000004748 I 0.702
PAX6 Sus scrofa ENSSSCG00000013320 I 0.702
PAX6 Ochotona princeps ENSOPRG00000001678 I 0.702
ENSSHAG00000016310 Sarcophilus harrisii ENSSHAG00000016310 I 0.702
Pax6 Mus musculus ENSMUSG00000027168 D 0.702
pax6a Danio rerio ENSDARG00000103379 I 0.702
PAX6 Dasypus novemcinctus ENSDNOG00000000761 I 0.702
ENSCSAG00000005253 Chlorocebus sabaeus ENSCSAG00000005253 I 0.702
PAX6 Callithrix jacchus ENSCJAG00000005942 I 0.702
PAX6 Bos taurus ENSBTAG00000004561 I 0.702
PAX6 Homo sapiens ENSG00000007372 D 0.702
PAX6 Gallus gallus ENSGALG00000012123 I 0.702
ENSMPUG00000011295 Mustela putorius furo ENSMPUG00000011295 I 0.702
PAX6 Anolis carolinensis ENSACAG00000002252 I 0.702
PAX6 Macaca mulatta ENSMMUG00000016810 I 0.702
PAX6 Myotis lucifugus ENSMLUG00000006517 I 0.702
PAX6 Microcebus murinus ENSMICG00000004089 I 0.702
ENSOARG00000016191 Ovis aries ENSOARG00000016191 I 0.702