estExt_Genewise1.C_510007 (Bigelowiella natans)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 estExt_Genewise1.C_510007 T240486_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF4
M03325_2.00 		Homo sapiens
GAANNTTCBVGAA
TTCBVGAANNTTC		 SELEX
Jolma et al.(2013)
HSF4_1 		0.340 0.422
HSF4
M05509_2.00 		Homo sapiens
VGAABVTTCKVGAAN
NTTCBMGAABVTTCB		 SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX 		0.340 0.422
HSF4
M10862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF4_Q3 		0.340 0.422
HSF4
M05510_2.00 		Homo sapiens
RGAABVWDCYRGAWN
NWTCYRGHWBVTTCY		 SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX 		0.340 0.422
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
JGI_V11_49541 HSF 72 165

Links

Other HSF family TFs
Other Bigelowiella natans TFs

251 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_8g105780 Medicago truncatula MTR_8g105780 I 0.370
Ca_10406 Cicer arietinum Ca_10406 I 0.360
AMSG_03636 Thecamonas trahens AMSG_03636 I 0.354
AT-HSFA8 Vitis vinifera VIT_01s0011g05970 I 0.354
Pavir.Ea01559 Panicum virgatum Pavir.Ea01559 I 0.354
GRMZM2G005815 Zea mays GRMZM2G005815 I 0.351
Si004605m.g Setaria italica Si004605m.g I 0.351
Gorai.009G032300 Gossypium raimondii Gorai.009G032300 I 0.351
POPTR_0008s13620 Populus trichocarpa POPTR_0008s13620 I 0.350
Sb03g025770 Sorghum bicolor Sb03g025770 I 0.350
Contig10067.0.g63 Oxytricha trifallax Contig10067.0.g63 I 0.350
Contig10723.0.g13 Oxytricha trifallax Contig10723.0.g13 I 0.350
Si039749m.g Setaria italica Si039749m.g I 0.349
Pavir.Eb02487 Panicum virgatum Pavir.Eb02487 I 0.349
BRADI3G43710 Brachypodium distachyon BRADI3G43710 I 0.348
GSMUA_Achr8G27820_001 Musa acuminata GSMUA_Achr8G27820_001 I 0.347
evm.TU.supercontig_28.162 Carica papaya evm.TU.supercontig_28.162 I 0.347
F775_00937 Aegilops tauschii F775_00937 I 0.346
Solyc06g053960.2 Solanum lycopersicum Solyc06g053960.2 I 0.346
Traes_6AS_1537629B3 Triticum aestivum Traes_6AS_1537629B3 I 0.346
HSF4 Ochotona princeps ENSOPRG00000015074 I 0.343
BRADI2G41530 Brachypodium distachyon BRADI2G41530 I 0.341
PGSC0003DMG400016270 Solanum tuberosum PGSC0003DMG400016270 I 0.341
ENSAMEG00000017238 Ailuropoda melanoleuca ENSAMEG00000017238 I 0.340
HSF4 Bos taurus ENSBTAG00000003514 I 0.340
HSF4 Canis familiaris ENSCAFG00000020379 I 0.340
ENSCSAG00000003768 Chlorocebus sabaeus ENSCSAG00000003768 I 0.340
Hsf4 Dipodomys ordii ENSDORG00000015128 I 0.340
HSF4 Equus caballus ENSECAG00000016708 I 0.340
HSF4 Homo sapiens ENSG00000102878 D 0.340
HSF4 Gorilla gorilla ENSGGOG00000011899 I 0.340
HSF4 Myotis lucifugus ENSMLUG00000011083 I 0.340
HSF4 Macaca mulatta ENSMMUG00000005906 I 0.340
ENSMPUG00000005418 Mustela putorius furo ENSMPUG00000005418 I 0.340
Hsf4 Mus musculus ENSMUSG00000033249 I 0.340
ENSNLEG00000004338 Nomascus leucogenys ENSNLEG00000004338 I 0.340
ENSOARG00000002740 Ovis aries ENSOARG00000002740 I 0.340
HSF4 Oryctolagus cuniculus ENSOCUG00000010001 I 0.340
HSF4 Otolemur garnettii ENSOGAG00000001391 I 0.340
ENSPANG00000005017 Papio anubis ENSPANG00000005017 I 0.340
ENSPPYG00000007441 Pongo abelii ENSPPYG00000007441 I 0.340
HSF4 Pan troglodytes ENSPTRG00000034007 I 0.340
HSF4 Pteropus vampyrus ENSPVAG00000000402 I 0.340
HSF4 Sus scrofa ENSSSCG00000002792 I 0.340
ENSSTOG00000027009 Ictidomys tridecemlineatus ENSSTOG00000027009 I 0.340
HSF4 Tursiops truncatus ENSTTRG00000010241 I 0.340
ENSBTAP00000004568-D1 Bos grunniens ENSBTAP00000004568-D1 I 0.340
BGIOSGA004459 Oryza indica BGIOSGA004459 I 0.339
HSF4 Cavia porcellus ENSCPOG00000010834 I 0.339
OBART01G30880 Oryza barthii OBART01G30880 I 0.339
OGLUM01G35030 Oryza glumaepatula OGLUM01G35030 I 0.339
OMERI01G28000 Oryza meridionalis OMERI01G28000 I 0.339
ONIVA01G35260 Oryza nivara ONIVA01G35260 I 0.339
ORGLA01G0253200 Oryza glaberrima ORGLA01G0253200 I 0.339
HSFA4B Oryza sativa OS01G0749300 I 0.339
Solyc09g082670.2 Solanum lycopersicum Solyc09g082670.2 I 0.338
TCM_037635 Theobroma cacao TCM_037635 I 0.338
OB01G39790 Oryza brachyantha OB01G39790 I 0.337
POPTR_0006s11680 Populus trichocarpa POPTR_0006s11680 I 0.337
RSKR_0000052100 Rhabditophanes kr3021 RSKR_0000052100 I 0.337
OPUNC01G15930 Oryza punctata OPUNC01G15930 I 0.336
PGSC0003DMG400008223 Solanum tuberosum PGSC0003DMG400008223 I 0.336
Si001439m.g Setaria italica Si001439m.g I 0.336
Pavir.Eb03132 Panicum virgatum Pavir.Eb03132 I 0.336
BRADI2G49860 Brachypodium distachyon BRADI2G49860 I 0.335
HSF4 Loxodonta africana ENSLAFG00000021984 I 0.335
GRMZM2G115456 Zea mays GRMZM2G115456 I 0.335
Sb03g034630 Sorghum bicolor Sb03g034630 I 0.335
cassava7697.valid.m1 Manihot esculenta cassava7697.valid.m1 I 0.335
Cagra.3356s0067 Capsella grandiflora Cagra.3356s0067 I 0.335
Carubv10004840m.g Capsella rubella Carubv10004840m.g I 0.335
Eucgr.C03465 Eucalyptus grandis Eucgr.C03465 I 0.335
HSF4 Dasypus novemcinctus ENSDNOG00000032363 I 0.334
GRMZM2G179802 Zea mays GRMZM2G179802 I 0.334
MTR_2g100680 Medicago truncatula MTR_2g100680 I 0.334
Solyc07g040680.2 Solanum lycopersicum Solyc07g040680.2 I 0.334
Solyc09g065660.2 Solanum lycopersicum Solyc09g065660.2 I 0.334
mgf006947m Mimulus guttatus mgf006947m I 0.334
Lus10022083.g Linum usitatissimum Lus10022083.g I 0.334
AMSG_04341 Thecamonas trahens AMSG_04341 I 0.333
Solyc12g098520.1 Solanum lycopersicum Solyc12g098520.1 I 0.333
Eucgr.H02675 Eucalyptus grandis Eucgr.H02675 I 0.333
Eucgr.L01331 Eucalyptus grandis Eucgr.L01331 I 0.333
gene13301-v1.0-hybrid Fragaria vesca gene13301-v1.0-hybrid I 0.333
Hsf4 Rattus norvegicus ENSRNOG00000015253 I 0.332
GRMZM2G118453 Zea mays GRMZM2G118453 I 0.332
OB03G40890 Oryza brachyantha OB03G40890 I 0.332
OPUNC03G31000 Oryza punctata OPUNC03G31000 I 0.332
PGSC0003DMG400032793 Solanum tuberosum PGSC0003DMG400032793 I 0.332
BGIOSGA006438 Oryza indica BGIOSGA006438 I 0.331
GLYMA13G16510 Glycine max GLYMA13G16510 I 0.331
LPERR02G13860 Leersia perrieri LPERR02G13860 I 0.331
OGLUM02G17550 Oryza glumaepatula OGLUM02G17550 I 0.331
OMERI02G17330 Oryza meridionalis OMERI02G17330 I 0.331
ONIVA02G18700 Oryza nivara ONIVA02G18700 I 0.331
OPUNC01G20490 Oryza punctata OPUNC01G20490 I 0.331
ORUFI02G18130 Oryza rufipogon ORUFI02G18130 I 0.331
HSFA5 Oryza sativa OS02G0496100 I 0.331
Sb04g020050 Sorghum bicolor Sb04g020050 I 0.331
VIT_11s0016g02010 Vitis vinifera VIT_11s0016g02010 I 0.331
Cucsa.116340 Cucumis sativus Cucsa.116340 I 0.331
Ciclev10008116m.g Citrus clementina Ciclev10008116m.g I 0.331
Eucgr.C03457 Eucalyptus grandis Eucgr.C03457 I 0.331
orange1.1g011260m.g Citrus sinensis orange1.1g011260m.g I 0.331
chr4.CM0297.80.nd Lotus japonicus chr4.CM0297.80.nd I 0.331
Bo2g165560 Brassica oleracea Bo2g165560 I 0.330
GSMUA_Achr7G24790_001 Musa acuminata GSMUA_Achr7G24790_001 I 0.330
LPERR01G17270 Leersia perrieri LPERR01G17270 I 0.330
OB01G29910 Oryza brachyantha OB01G29910 I 0.330
Ca_03183 Cicer arietinum Ca_03183 I 0.330
Cla015028 Citrullus lanatus Cla015028 I 0.330
Cucsa.084230 Cucumis sativus Cucsa.084230 I 0.330
mgf007059m Mimulus guttatus mgf007059m I 0.330
mgf011445m Mimulus guttatus mgf011445m I 0.330
Eucgr.C03447 Eucalyptus grandis Eucgr.C03447 I 0.330
Eucgr.C03454 Eucalyptus grandis Eucgr.C03454 I 0.330
Eucgr.C03456 Eucalyptus grandis Eucgr.C03456 I 0.330
evm.TU.supercontig_2.169 Carica papaya evm.TU.supercontig_2.169 I 0.330
SapurV1A.0015s0620 Salix purpurea SapurV1A.0015s0620 I 0.330
BGIOSGA009826 Oryza indica BGIOSGA009826 I 0.329
HSF4 Procavia capensis ENSPCAG00000013012 I 0.329
GSMUA_Achr3G15740_001 Musa acuminata GSMUA_Achr3G15740_001 I 0.329
OBART03G33860 Oryza barthii OBART03G33860 I 0.329
OGLUM03G33530 Oryza glumaepatula OGLUM03G33530 I 0.329
ORGLA03G0308600 Oryza glaberrima ORGLA03G0308600 I 0.329
ORUFI03G35260 Oryza rufipogon ORUFI03G35260 I 0.329
PRUPE_ppa006514mg Prunus persica PRUPE_ppa006514mg I 0.329
Si035840m.g Setaria italica Si035840m.g I 0.329
VIT_10s0003g01770 Vitis vinifera VIT_10s0003g01770 I 0.329
VIT_12s0028g01410 Vitis vinifera VIT_12s0028g01410 I 0.329
Ca_00428 Cicer arietinum Ca_00428 I 0.329
Pm005887 Prunus mume Pm005887 I 0.329
Lus10006618.g Linum usitatissimum Lus10006618.g I 0.329
Lus10011941.g Linum usitatissimum Lus10011941.g I 0.329
Lus10027627.g Linum usitatissimum Lus10027627.g I 0.329
HSF4 Felis catus ENSFCAG00000014099 I 0.328
GSMUA_Achr4G04500_001 Musa acuminata GSMUA_Achr4G04500_001 I 0.328
ONIVA03G35150 Oryza nivara ONIVA03G35150 I 0.328
PGSC0003DMG400004662 Solanum tuberosum PGSC0003DMG400004662 I 0.328
Eucgr.A01948 Eucalyptus grandis Eucgr.A01948 I 0.328
Eucgr.C03433 Eucalyptus grandis Eucgr.C03433 I 0.328
Gorai.012G044200 Gossypium raimondii Gorai.012G044200 I 0.328
GLYMA05G34450 Glycine max GLYMA05G34450 I 0.327
GRMZM2G173090 Zea mays GRMZM2G173090 I 0.327
OPUNC03G08660 Oryza punctata OPUNC03G08660 I 0.327
Bostr.26833s0872 Boechera stricta Bostr.26833s0872 I 0.327
Cagra.4610s0006 Capsella grandiflora Cagra.4610s0006 I 0.327
Carubv10004729m.g Capsella rubella Carubv10004729m.g I 0.327
Ciclev10008617m.g Citrus clementina Ciclev10008617m.g I 0.327
Eucgr.C03440 Eucalyptus grandis Eucgr.C03440 I 0.327
orange1.1g016091m.g Citrus sinensis orange1.1g016091m.g I 0.327
HSFA9 Arabidopsis thaliana AT5G54070 I 0.326
Bo4g128450 Brassica oleracea Bo4g128450 I 0.326
Bra029226 Brassica rapa Bra029226 I 0.326
OMERI01G18590 Oryza meridionalis OMERI01G18590 I 0.326
TRAES3BF029100010CFD_g Triticum aestivum TRAES3BF029100010CFD_g I 0.326
Cla017103 Citrullus lanatus Cla017103 I 0.326
29739.m003565 Ricinus communis 29739.m003565 I 0.326
Cucsa.117100 Cucumis sativus Cucsa.117100 I 0.326
Cagra.4622s0012 Capsella grandiflora Cagra.4622s0012 I 0.326
Carubv10028638m.g Capsella rubella Carubv10028638m.g I 0.326
MDP0000191541 Malus domestica MDP0000191541 I 0.326
Thhalv10002333m.g Eutrema salsugineum Thhalv10002333m.g I 0.326
HSFA5 Arabidopsis thaliana AT4G13980 I 0.325
BGIOSGA003800 Oryza indica BGIOSGA003800 I 0.325
Bra032752 Brassica rapa Bra032752 I 0.325
AT-HSFA5 Arabidopsis lyrata fgenesh2_kg.7__2946__AT4G13980.1 I 0.325
GLYMA03G34900 Glycine max GLYMA03G34900 I 0.325
OBART01G20060 Oryza barthii OBART01G20060 I 0.325
OGLUM01G23720 Oryza glumaepatula OGLUM01G23720 I 0.325
ONIVA01G22600 Oryza nivara ONIVA01G22600 I 0.325
OPUNC02G15430 Oryza punctata OPUNC02G15430 I 0.325
ORGLA01G0166200 Oryza glaberrima ORGLA01G0166200 I 0.325
ORUFI01G22600 Oryza rufipogon ORUFI01G22600 I 0.325
ORUFI01G34020 Oryza rufipogon ORUFI01G34020 I 0.325
HSFA6B Oryza sativa OS01G0571300 I 0.325
POPTR_0006s24330 Populus trichocarpa POPTR_0006s24330 I 0.325
Bostr.9017s0008 Boechera stricta Bostr.9017s0008 I 0.325
HSFA2 Arabidopsis thaliana AT2G26150 I 0.324
BRADI1G01130 Brachypodium distachyon BRADI1G01130 I 0.324
F775_04438 Aegilops tauschii F775_04438 I 0.324
ATHSFA2 Arabidopsis lyrata fgenesh2_kg.4__531__AT2G26150.1 I 0.324
GLYMA16G13400 Glycine max GLYMA16G13400 I 0.324
GRMZM2G384339 Zea mays GRMZM2G384339 I 0.324
MLOC_69675 Hordeum vulgare MLOC_69675 I 0.324
Sb01g000730 Sorghum bicolor Sb01g000730 I 0.324
TCM_037308 Theobroma cacao TCM_037308 I 0.324
Cucsa.016480 Cucumis sativus Cucsa.016480 I 0.324
Bostr.26326s0040 Boechera stricta Bostr.26326s0040 I 0.324
Cagra.7662s0001 Capsella grandiflora Cagra.7662s0001 I 0.324
Carubv10025710m.g Capsella rubella Carubv10025710m.g I 0.324
Pavir.Ia00087 Panicum virgatum Pavir.Ia00087 I 0.324
PK12544.1 Cannabis sativa PK12544.1 I 0.324
GSMUA_Achr3G27600_001 Musa acuminata GSMUA_Achr3G27600_001 I 0.323
OB03G27910 Oryza brachyantha OB03G27910 I 0.323
OMERI03G31070 Oryza meridionalis OMERI03G31070 I 0.323
Si035526m.g Setaria italica Si035526m.g I 0.323
gene02705-v1.0-hybrid Fragaria vesca gene02705-v1.0-hybrid I 0.323
Lus10013797.g Linum usitatissimum Lus10013797.g I 0.323
Pavir.Ib04475 Panicum virgatum Pavir.Ib04475 I 0.323
SapurV1A.0108s0230 Salix purpurea SapurV1A.0108s0230 I 0.323
Thhalv10025090m.g Eutrema salsugineum Thhalv10025090m.g I 0.323
chr4.CM0042.1510.nc Lotus japonicus chr4.CM0042.1510.nc I 0.323
AMTR_s00002p00270580 Amborella trichopoda AMTR_s00002p00270580 I 0.322
HSF4 Microcebus murinus ENSMICG00000007714 I 0.322
LPERR03G35390 Leersia perrieri LPERR03G35390 I 0.322
MLOC_74270 Hordeum vulgare MLOC_74270 I 0.322
MTR_6g043060 Medicago truncatula MTR_6g043060 I 0.322
OBART03G41440 Oryza barthii OBART03G41440 I 0.322
OGLUM03G41290 Oryza glumaepatula OGLUM03G41290 I 0.322
OMERI03G38170 Oryza meridionalis OMERI03G38170 I 0.322
ONIVA03G43540 Oryza nivara ONIVA03G43540 I 0.322
OPUNC03G38490 Oryza punctata OPUNC03G38490 I 0.322
ORGLA03G0383200 Oryza glaberrima ORGLA03G0383200 I 0.322
HSFA1 Oryza sativa OS03G0854500 I 0.322
PGSC0003DMG401019343 Solanum tuberosum PGSC0003DMG401019343 I 0.322
PGSC0003DMG402019343 Solanum tuberosum PGSC0003DMG402019343 I 0.322
Si006775m.g Setaria italica Si006775m.g I 0.322
Si006875m.g Setaria italica Si006875m.g I 0.322
mgf013331m Mimulus guttatus mgf013331m I 0.322
evm.TU.supercontig_157.44 Carica papaya evm.TU.supercontig_157.44 I 0.322
SapurV1A.0086s0550 Salix purpurea SapurV1A.0086s0550 I 0.322
Bo3g083520 Brassica oleracea Bo3g083520 I 0.321
GRMZM2G118485 Zea mays GRMZM2G118485 I 0.321
GSMUA_Achr6G00960_001 Musa acuminata GSMUA_Achr6G00960_001 I 0.321
gw1.207.102.1 Physcomitrella patens gw1.207.102.1 I 0.321
mgf009243m Mimulus guttatus mgf009243m I 0.321
Eucgr.C03056 Eucalyptus grandis Eucgr.C03056 I 0.321
Lus10016634.g Linum usitatissimum Lus10016634.g I 0.321
Lus10039134.g Linum usitatissimum Lus10039134.g I 0.321
LPERR02G08320 Leersia perrieri LPERR02G08320 I 0.320
Cla006127 Citrullus lanatus Cla006127 I 0.320
SapurV1A.1190s0030 Salix purpurea SapurV1A.1190s0030 I 0.320
chr1.CM0133.110.nc Lotus japonicus chr1.CM0133.110.nc I 0.320
Bo9g062710 Brassica oleracea Bo9g062710 I 0.319
Bra013412 Brassica rapa Bra013412 I 0.319
Bra017595 Brassica rapa Bra017595 I 0.319
GSMUA_Achr5G03000_001 Musa acuminata GSMUA_Achr5G03000_001 I 0.319
LPERR07G04400 Leersia perrieri LPERR07G04400 I 0.319
Ca_08627 Cicer arietinum Ca_08627 I 0.319
Cla017029 Citrullus lanatus Cla017029 I 0.319
cassava14764.m1 Manihot esculenta cassava14764.m1 I 0.319
Aquca_020_00446 Aquilegia coerulea Aquca_020_00446 I 0.319
Cagra.13025s0005 Capsella grandiflora Cagra.13025s0005 I 0.319
Carubv10007333m.g Capsella rubella Carubv10007333m.g I 0.319
Eucgr.C00873 Eucalyptus grandis Eucgr.C00873 I 0.319
Gorai.006G224000 Gossypium raimondii Gorai.006G224000 I 0.319
Pavir.Ab01320 Panicum virgatum Pavir.Ab01320 I 0.319
Pavir.Da00730 Panicum virgatum Pavir.Da00730 I 0.318
Pavir.J00967 Panicum virgatum Pavir.J00967 I 0.318
PK02473.1 Cannabis sativa PK02473.1 I 0.318