CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSPATT00023254001
(
Paramecium tetraurelia
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
GSPATT00023254001
T240848_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSFB2A
M00869_2.00
Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN
PBM
Franco-Zorrilla et al.(2014)
HSFB2A
0.318
0.472
HSFB2A
M06952_2.00
Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF6_col_a
0.318
0.472
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAK90080
HSF
19
120
FLLKTYEILENDSLTDLISWNKEGTSFIVFKPSDMSSKVLANYFKHKNYPSFLRQLNMYNFRKTRNQFGQSEFRHRWFKRGLKQQLNHNLSRSTLQYIRRRN
Links
Other
HSF
family TFs
Other
Paramecium tetraurelia
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSPATT00012787001
Paramecium tetraurelia
GSPATT00012787001
N
0.515
GSPATT00013220001
Paramecium tetraurelia
GSPATT00013220001
N
0.515
GSPATT00023954001
Paramecium tetraurelia
GSPATT00023954001
I
0.503
GSPATT00026603001
Paramecium tetraurelia
GSPATT00026603001
N
0.489
GSPATT00007043001
Paramecium tetraurelia
GSPATT00007043001
N
0.478
GSPATT00016151001
Paramecium tetraurelia
GSPATT00016151001
I
0.363
GSPATT00034304001
Paramecium tetraurelia
GSPATT00034304001
I
0.363
GSPATT00033038001
Paramecium tetraurelia
GSPATT00033038001
N
0.361
TTHERM_00794590
Tetrahymena thermophila
TTHERM_00794590
N
0.354
GLYMA13G24860
Glycine max
GLYMA13G24860
I
0.351
GSPATT00036105001
Paramecium tetraurelia
GSPATT00036105001
N
0.351
Cucsa.116340
Cucumis sativus
Cucsa.116340
I
0.346
GLYMA01G34490
Glycine max
GLYMA01G34490
I
0.344
GSPATT00026018001
Paramecium tetraurelia
GSPATT00026018001
I
0.343
GSPATT00026202001
Paramecium tetraurelia
GSPATT00026202001
N
0.343
GSPATT00035082001
Paramecium tetraurelia
GSPATT00035082001
N
0.342
mgf013076m
Mimulus guttatus
mgf013076m
I
0.339
TTHERM_00571940
Tetrahymena thermophila
TTHERM_00571940
I
0.337
GSPATT00018299001
Paramecium tetraurelia
GSPATT00018299001
N
0.336
GSPATT00030420001
Paramecium tetraurelia
GSPATT00030420001
I
0.335
GSPATT00018752001
Paramecium tetraurelia
GSPATT00018752001
N
0.334
GSPATT00011836001
Paramecium tetraurelia
GSPATT00011836001
N
0.331
AT-HSFC1
Vitis vinifera
VIT_11s0016g03940
I
0.331
Ciclev10015413m.g
Citrus clementina
Ciclev10015413m.g
I
0.331
evm.TU.supercontig_27.46
Carica papaya
evm.TU.supercontig_27.46
I
0.331
SapurV1A.0558s0090
Salix purpurea
SapurV1A.0558s0090
I
0.331
PGSC0003DMG400017334
Solanum tuberosum
PGSC0003DMG400017334
I
0.330
mgf014237m
Mimulus guttatus
mgf014237m
I
0.330
Gorai.012G044200
Gossypium raimondii
Gorai.012G044200
I
0.330
Ciclev10008768m.g
Citrus clementina
Ciclev10008768m.g
I
0.329
orange1.1g018495m.g
Citrus sinensis
orange1.1g018495m.g
I
0.329
Contig731.1.g124
Oxytricha trifallax
Contig731.1.g124
I
0.329
PK22356.1
Cannabis sativa
PK22356.1
I
0.329
TCM_001784
Theobroma cacao
TCM_001784
I
0.328
Lus10023636.g
Linum usitatissimum
Lus10023636.g
I
0.328
cassava8193.valid.m1
Manihot esculenta
cassava8193.valid.m1
I
0.327
Lus10008007.g
Linum usitatissimum
Lus10008007.g
I
0.327
Lus10024508.g
Linum usitatissimum
Lus10024508.g
I
0.327
GSMUA_Achr1G03910_001
Musa acuminata
GSMUA_Achr1G03910_001
I
0.326
GSPATT00000920001
Paramecium tetraurelia
GSPATT00000920001
N
0.326
GSPATT00016622001
Paramecium tetraurelia
GSPATT00016622001
N
0.326
GSPATT00026020001
Paramecium tetraurelia
GSPATT00026020001
N
0.326
orange1.1g015162m.g
Citrus sinensis
orange1.1g015162m.g
I
0.325
GSPATT00008733001
Paramecium tetraurelia
GSPATT00008733001
N
0.324
GSPATT00033235001
Paramecium tetraurelia
GSPATT00033235001
N
0.324
Ca_02416
Cicer arietinum
Ca_02416
I
0.324
cassava29954.valid.m1
Manihot esculenta
cassava29954.valid.m1
I
0.324
Bostr.26833s0037
Boechera stricta
Bostr.26833s0037
I
0.324
Cagra.4553s0008
Capsella grandiflora
Cagra.4553s0008
I
0.324
Carubv10026734m.g
Capsella rubella
Carubv10026734m.g
I
0.324
Lus10034907.g
Linum usitatissimum
Lus10034907.g
I
0.324
GSPATT00013959001
Paramecium tetraurelia
GSPATT00013959001
N
0.323
POPTR_0018s05770
Populus trichocarpa
POPTR_0018s05770
I
0.322
Cla009775
Citrullus lanatus
Cla009775
I
0.322
Eucgr.A01948
Eucalyptus grandis
Eucgr.A01948
I
0.322
Eucgr.C01043
Eucalyptus grandis
Eucgr.C01043
I
0.322
chr2.CM0304.780.nc
Lotus japonicus
chr2.CM0304.780.nc
I
0.322
GSPATT00005596001
Paramecium tetraurelia
GSPATT00005596001
N
0.321
AT-HSFB2B
Vitis vinifera
VIT_02s0025g04170
I
0.321
Contig10067.0.g63
Oxytricha trifallax
Contig10067.0.g63
I
0.321
Contig10723.0.g13
Oxytricha trifallax
Contig10723.0.g13
I
0.321
GLYMA01G42640
Glycine max
GLYMA01G42640
I
0.320
Solyc08g080540.2
Solanum lycopersicum
Solyc08g080540.2
I
0.320
Ciclev10016707m.g
Citrus clementina
Ciclev10016707m.g
I
0.320
evm.TU.supercontig_74.64
Carica papaya
evm.TU.supercontig_74.64
I
0.320
Gorai.004G280100
Gossypium raimondii
Gorai.004G280100
I
0.320
AMTR_s00132p00118400
Amborella trichopoda
AMTR_s00132p00118400
I
0.319
Bo3g108110
Brassica oleracea
Bo3g108110
I
0.319
Bra010049
Brassica rapa
Bra010049
I
0.319
GLYMA11G02800
Glycine max
GLYMA11G02800
I
0.319
PGSC0003DMG400003053
Solanum tuberosum
PGSC0003DMG400003053
I
0.319
PGSC0003DMG400012105
Solanum tuberosum
PGSC0003DMG400012105
I
0.319
POPTR_0001s08990
Populus trichocarpa
POPTR_0001s08990
I
0.319
Ca_12967
Cicer arietinum
Ca_12967
I
0.319
Cla017029
Citrullus lanatus
Cla017029
I
0.319
Pm027421
Prunus mume
Pm027421
I
0.319
29636.m000750
Ricinus communis
29636.m000750
I
0.319
mgf025463m
Mimulus guttatus
mgf025463m
I
0.319
Gorai.004G208800
Gossypium raimondii
Gorai.004G208800
I
0.319
SapurV1A.0507s0120
Salix purpurea
SapurV1A.0507s0120
I
0.319
HSFB2A
Arabidopsis thaliana
AT5G62020
D
0.318
AT-HSFB2A
Arabidopsis lyrata
scaffold_802851.1
I
0.318
PK17549.1
Cannabis sativa
PK17549.1
I
0.318