gw1.15.137.1 (Bigelowiella natans)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 gw1.15.137.1 T240898_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.324 0.617
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.324 0.617
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.323 0.550
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.323 0.550
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
JGI_V11_27542 HSF 3 65

Links

Other HSF family TFs
Other Bigelowiella natans TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA17G06160 Glycine max GLYMA17G06160 I 0.348
Ca_07800 Cicer arietinum Ca_07800 I 0.338
Gorai.007G139600 Gossypium raimondii Gorai.007G139600 I 0.335
GLYMA04G05500 Glycine max GLYMA04G05500 I 0.334
PRUPE_ppa016533mg Prunus persica PRUPE_ppa016533mg I 0.334
Pm027197 Prunus mume Pm027197 I 0.334
GLYMA13G16510 Glycine max GLYMA13G16510 I 0.333
Eucgr.C00873 Eucalyptus grandis Eucgr.C00873 I 0.333
chr4.CM0297.80.nd Lotus japonicus chr4.CM0297.80.nd I 0.333
Ca_03183 Cicer arietinum Ca_03183 I 0.331
cassava721.valid.m1 Manihot esculenta cassava721.valid.m1 I 0.331
evm.TU.supercontig_50.58 Carica papaya evm.TU.supercontig_50.58 I 0.331
Gorai.004G076900 Gossypium raimondii Gorai.004G076900 I 0.331
Lus10011941.g Linum usitatissimum Lus10011941.g I 0.331
Lus10027627.g Linum usitatissimum Lus10027627.g I 0.331
GSMUA_Achr8G20520_001 Musa acuminata GSMUA_Achr8G20520_001 I 0.328
HSF1 Arabidopsis lyrata fgenesh2_kg.7__2533__AT4G17750.1 I 0.327
GLOINDRAFT_240353 Rhizophagus irregularis GLOINDRAFT_240353 I 0.327
POPTR_0014s13780 Populus trichocarpa POPTR_0014s13780 I 0.327
TCM_004275 Theobroma cacao TCM_004275 I 0.327
Lus10000492.g Linum usitatissimum Lus10000492.g I 0.327
Lus10014698.g Linum usitatissimum Lus10014698.g I 0.327
MDP0000456290 Malus domestica MDP0000456290 I 0.327
MDP0000746803 Malus domestica MDP0000746803 I 0.327
chr5.CM0024.490.nc Lotus japonicus chr5.CM0024.490.nc I 0.327
Bra029291 Brassica rapa Bra029291 I 0.326
Bra029292 Brassica rapa Bra029292 I 0.326
Cucsa.212820 Cucumis sativus Cucsa.212820 I 0.326
Solyc07g055710.2 Solanum lycopersicum Solyc07g055710.2 I 0.325
cassava35573.valid.m1 Manihot esculenta cassava35573.valid.m1 I 0.325
Ciclev10020718m.g Citrus clementina Ciclev10020718m.g I 0.325
orange1.1g017694m.g Citrus sinensis orange1.1g017694m.g I 0.325
HSFA1B Arabidopsis thaliana AT5G16820 D 0.324
AT-HSFA6A Arabidopsis lyrata fgenesh1_pg.C_scaffold_8000489 I 0.324
Eucgr.C03452 Eucalyptus grandis Eucgr.C03452 I 0.324
PDK_20s1342122g001 Phoenix dactylifera PDK_20s1342122g001 I 0.324
HSFA6A Arabidopsis thaliana AT5G43840 D 0.323
Bra023584 Brassica rapa Bra023584 I 0.323
MTR_1g071360 Medicago truncatula MTR_1g071360 I 0.323
Pm020253 Prunus mume Pm020253 I 0.323
29912.m005397 Ricinus communis 29912.m005397 I 0.323
Bostr.2618s0023 Boechera stricta Bostr.2618s0023 I 0.323
Eucgr.C03433 Eucalyptus grandis Eucgr.C03433 I 0.323
HSF3 Arabidopsis lyrata fgenesh2_kg.6__1675__AT5G16820.1 I 0.322
GLYMA15G09280 Glycine max GLYMA15G09280 I 0.322
Cucsa.117100 Cucumis sativus Cucsa.117100 I 0.322
Bostr.26833s0037 Boechera stricta Bostr.26833s0037 I 0.322
Cagra.0434s0049 Capsella grandiflora Cagra.0434s0049 I 0.322
Cagra.4553s0008 Capsella grandiflora Cagra.4553s0008 I 0.322
Carubv10003259m.g Capsella rubella Carubv10003259m.g I 0.322
Carubv10026734m.g Capsella rubella Carubv10026734m.g I 0.322
Ciclev10008617m.g Citrus clementina Ciclev10008617m.g I 0.322
gene20347-v1.0-hybrid Fragaria vesca gene20347-v1.0-hybrid I 0.322
MDP0000301101 Malus domestica MDP0000301101 I 0.322
orange1.1g016091m.g Citrus sinensis orange1.1g016091m.g I 0.322
Thhalv10013428m.g Eutrema salsugineum Thhalv10013428m.g I 0.322
Contig10067.0.g63 Oxytricha trifallax Contig10067.0.g63 I 0.322
Contig10723.0.g13 Oxytricha trifallax Contig10723.0.g13 I 0.322
BRADI1G55630 Brachypodium distachyon BRADI1G55630 I 0.321
PRUPE_ppa004559mg Prunus persica PRUPE_ppa004559mg I 0.321
PRUPE_ppa010224mg Prunus persica PRUPE_ppa010224mg I 0.321
Pm011227 Prunus mume Pm011227 I 0.321
29883.m001955 Ricinus communis 29883.m001955 I 0.321
Bostr.3148s0085 Boechera stricta Bostr.3148s0085 I 0.321
Bo00967s020 Brassica oleracea Bo00967s020 I 0.320
Bo2g161830 Brassica oleracea Bo2g161830 I 0.320
Bo9g151630 Brassica oleracea Bo9g151630 I 0.320
Bo9g161770 Brassica oleracea Bo9g161770 I 0.320
Bra008593 Brassica rapa Bra008593 I 0.320
VIT_02s0012g01810 Vitis vinifera VIT_02s0012g01810 I 0.320
GSMUA_Achr3G15640_001 Musa acuminata GSMUA_Achr3G15640_001 I 0.319
TCM_037635 Theobroma cacao TCM_037635 I 0.319
VIT_11s0016g02010 Vitis vinifera VIT_11s0016g02010 I 0.319
Cla017103 Citrullus lanatus Cla017103 I 0.319
Aquca_039_00029 Aquilegia coerulea Aquca_039_00029 I 0.319
TCM_025482 Theobroma cacao TCM_025482 I 0.318