Alligator_sinensis_CCG019475.1 (Alligator sinensis)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Alligator_sinensis_CCG019475.1 T242545_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hsf2
M09231_2.00 		Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A 		0.361 0.727
HSF2
M03324_2.00 		Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC		 SELEX
Jolma et al.(2013)
HSF2_1 		0.354 0.701
HSF2
M02744_2.00 		Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC		 SELEX
Jolma et al.(2010)
HSF2_dimertrimer 		0.354 0.701
HSF2
M05505_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX 		0.354 0.701
HSF2
M05507_2.00 		Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB		 SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX 		0.354 0.701
HSF2
M09229_2.00 		Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A 		0.354 0.701
HSF2
M10859_2.00 		Homo sapiens
VGAANNWTCB
VGAWNNTTCB		 Transfac
Matys et al.(2006)
V$HSF2_01 		0.354 0.701
HSF2
M10860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_02 		0.354 0.701
HSF2
M10861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_Q6 		0.354 0.701
HSF2
M05506_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX 		0.354 0.701
HSF2
M05508_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX 		0.354 0.701
hsf2
M02248_2.00 		Danio rerio
NNNWGTTCTATNN
NNATAGAACWNNN		 PBM
Weirauch et al.(2014)
pTH9010 		0.337 0.649
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG019475.1 HSF 1 80

Links

Other HSF family TFs
Other Alligator sinensis TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSFALG00000004260 Ficedula albicollis ENSFALG00000004260 I 0.487
ENSTGUG00000002805 Taeniopygia guttata ENSTGUG00000002805 I 0.487
Aan_R009930 Calypte anna Aan_R009930 I 0.487
Afo_R014105 Aptenodytes forsteri Afo_R014105 I 0.487
Gfo_R015522 Geospiza fortis Gfo_R015522 I 0.487
Tal_R013611 Tyto alba Tal_R013611 I 0.487
ENSAPLG00000005126 Anas platyrhynchos ENSAPLG00000005126 I 0.483
ENSGALG00000004644 Gallus gallus ENSGALG00000004644 I 0.477
ENSMGAG00000000814 Meleagris gallopavo ENSMGAG00000000814 I 0.477
ENSACAG00000003529 Anolis carolinensis ENSACAG00000003529 I 0.428
ENSOANG00000008146 Ornithorhynchus anatinus ENSOANG00000008146 I 0.428
Pvit_13286 Pogona vitticeps Pvit_13286 I 0.418
Ogr08326 Ophisaurus gracilis Ogr08326 N 0.400
ENSLACG00000022562 Latimeria chalumnae ENSLACG00000022562 I 0.392
ENSSHAG00000005636 Sarcophilus harrisii ENSSHAG00000005636 I 0.387
ENSDNOG00000048985 Dasypus novemcinctus ENSDNOG00000048985 I 0.375
ENSMODG00000027338 Monodelphis domestica ENSMODG00000027338 I 0.367
ENSLOCG00000014654 Lepisosteus oculatus ENSLOCG00000014654 I 0.366
ENSGALG00000014870 Gallus gallus ENSGALG00000014870 I 0.365
HSF2 Meleagris gallopavo ENSMGAG00000013320 I 0.365
HSF2 Anolis carolinensis ENSACAG00000001260 I 0.363
hsf3 Xenopus tropicalis XB-GENE-1021762 I 0.362
Hsf2 Mus musculus ENSMUSG00000019878 D 0.361
Aan_R009617 Calypte anna Aan_R009617 I 0.356
ENSAMEG00000007373 Ailuropoda melanoleuca ENSAMEG00000007373 I 0.354
HSF2 Bos taurus ENSBTAG00000012946 I 0.354
ENSCHOG00000010951 Choloepus hoffmanni ENSCHOG00000010951 I 0.354
HSF2 Callithrix jacchus ENSCJAG00000003956 I 0.354
HSF2 Cavia porcellus ENSCPOG00000007509 I 0.354
ENSCSAG00000016240 Chlorocebus sabaeus ENSCSAG00000016240 I 0.354
HSF2 Dasypus novemcinctus ENSDNOG00000031260 I 0.354
HSF2 Equus caballus ENSECAG00000012553 I 0.354
HSF2 Erinaceus europaeus ENSEEUG00000000435 I 0.354
ENSFCAG00000025714 Felis catus ENSFCAG00000025714 I 0.354
HSF2 Homo sapiens ENSG00000025156 D 0.354
HSF2 Gorilla gorilla ENSGGOG00000023192 I 0.354
HSF2 Loxodonta africana ENSLAFG00000006440 I 0.354
ENSMICG00000006415 Microcebus murinus ENSMICG00000006415 I 0.354
HSF2 Myotis lucifugus ENSMLUG00000002355 I 0.354
HSF2 Macaca mulatta ENSMMUG00000007910 I 0.354
ENSMPUG00000014453 Mustela putorius furo ENSMPUG00000014453 I 0.354
ENSNLEG00000013721 Nomascus leucogenys ENSNLEG00000013721 I 0.354
ENSOARG00000008274 Ovis aries ENSOARG00000008274 I 0.354
HSF2 Oryctolagus cuniculus ENSOCUG00000025991 I 0.354
HSF2 Otolemur garnettii ENSOGAG00000015721 I 0.354
ENSPANG00000022516 Papio anubis ENSPANG00000022516 I 0.354
HSF2 Procavia capensis ENSPCAG00000016109 I 0.354
ENSPPYG00000016976 Pongo abelii ENSPPYG00000016976 I 0.354
HSF2 Pan troglodytes ENSPTRG00000018561 I 0.354
HSF2 Sus scrofa ENSSSCG00000004238 I 0.354
ENSTBEG00000013569 Tupaia belangeri ENSTBEG00000013569 I 0.354
ENSTSYG00000005378 Tarsius syrichta ENSTSYG00000005378 I 0.354
HSF2 Tursiops truncatus ENSTTRG00000000247 I 0.354
HSF2 Vicugna pacos ENSVPAG00000009387 I 0.354
ENSP00000357440-D1 Bos grunniens ENSP00000357440-D1 I 0.354
Myotis_brandtii_HSF2_10035618 Myotis brandtii Myotis_brandtii_HSF2_10035618 I 0.354
ENSAPLG00000014710 Anas platyrhynchos ENSAPLG00000014710 I 0.353
Afo_R005569 Aptenodytes forsteri Afo_R005569 I 0.353
Alligator_sinensis_CCG019450.1 Alligator sinensis Alligator_sinensis_CCG019450.1 I 0.353
Ogr00694 Ophisaurus gracilis Ogr00694 I 0.353
HSF2 Echinops telfairi ENSETEG00000006154 I 0.352
ENSPSIG00000014566 Pelodiscus sinensis ENSPSIG00000014566 I 0.352
Cmyd_10004276 Chelonia mydas Cmyd_10004276 I 0.352
ENSLACG00000002436 Latimeria chalumnae ENSLACG00000002436 I 0.351
Hsf2 Rattus norvegicus ENSRNOG00000000808 I 0.351
HSF2 Monodelphis domestica ENSMODG00000017753 I 0.350
ENSSHAG00000013467 Sarcophilus harrisii ENSSHAG00000013467 I 0.350
Hsf2 Dipodomys ordii ENSDORG00000012571 I 0.349
Tal_R003171 Tyto alba Tal_R003171 I 0.349
ENSFALG00000011294 Ficedula albicollis ENSFALG00000011294 I 0.348
HSF2 Taeniopygia guttata ENSTGUG00000011838 I 0.348
hsf2.L Xenopus laevis XB-GENE-954983 I 0.348
ENSCSAG00000005351 Chlorocebus sabaeus ENSCSAG00000005351 I 0.347
ENSSTOG00000021693 Ictidomys tridecemlineatus ENSSTOG00000021693 I 0.347
ENSONIG00000001677 Oreochromis niloticus ENSONIG00000001677 I 0.346
Gfo_R016174 Geospiza fortis Gfo_R016174 I 0.346
XP_002937261 Xenopus tropicalis XP_002937261 I 0.345
XP_002937262 Xenopus tropicalis XP_002937262 I 0.345
HSF2 Ornithorhynchus anatinus ENSOANG00000014662 I 0.344
ENSOCUG00000022713 Oryctolagus cuniculus ENSOCUG00000022713 I 0.342
hsf2 Gasterosteus aculeatus ENSGACG00000004065 I 0.339
Brh_R007241 Buceros rhinoceros Brh_R007241 I 0.338
XP_002937263 Xenopus tropicalis XP_002937263 I 0.338
hsf2 Danio rerio ENSDARG00000053097 D 0.337
ENSAMXG00000017965 Astyanax mexicanus ENSAMXG00000017965 I 0.334
hsf2 Oryzias latipes ENSORLG00000015498 I 0.334
Brh_R006341 Buceros rhinoceros Brh_R006341 N 0.332
ENSGMOG00000014148 Gadus morhua ENSGMOG00000014148 I 0.327
ENSFCAG00000027283 Felis catus ENSFCAG00000027283 I 0.326
ENSLOCG00000017255 Lepisosteus oculatus ENSLOCG00000017255 I 0.326
ENSACAG00000013094 Anolis carolinensis ENSACAG00000013094 I 0.323
ENSAMXG00000020456 Astyanax mexicanus ENSAMXG00000020456 I 0.323
hsf4 Danio rerio ENSDARG00000013251 I 0.323
ENSGMOG00000019339 Gadus morhua ENSGMOG00000019339 I 0.323
ENSLOCG00000007976 Lepisosteus oculatus ENSLOCG00000007976 I 0.323
Ogr12192 Ophisaurus gracilis Ogr12192 I 0.323
Pvit_07213 Pogona vitticeps Pvit_07213 I 0.323
XP_002937220 Xenopus tropicalis XP_002937220 I 0.323
Alligator_sinensis_CCG021829.1 Alligator sinensis Alligator_sinensis_CCG021829.1 I 0.322
hsf4 Gasterosteus aculeatus ENSGACG00000013994 I 0.321
ENSONIG00000010204 Oreochromis niloticus ENSONIG00000010204 I 0.321
hsf4 Oryzias latipes ENSORLG00000013768 I 0.321
ENSPFOG00000004675 Poecilia formosa ENSPFOG00000004675 I 0.321
ENSXMAG00000005948 Xiphophorus maculatus ENSXMAG00000005948 I 0.321
ENSTBEG00000012453 Tupaia belangeri ENSTBEG00000012453 I 0.319