Pm009258 (Prunus mume)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Pm009258 T242639_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.340 0.446
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.340 0.446
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm009258 HSF 41 118

Links

Other HSF family TFs
Other Prunus mume TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400016270 Solanum tuberosum PGSC0003DMG400016270 I 0.348
PRUPE_ppa1027143mg Prunus persica PRUPE_ppa1027143mg I 0.346
Pm009237 Prunus mume Pm009237 I 0.346
Solyc06g053960.2 Solanum lycopersicum Solyc06g053960.2 I 0.344
MDP0000253499 Malus domestica MDP0000253499 I 0.342
MDP0000273175 Malus domestica MDP0000273175 I 0.342
MDP0000319910 Malus domestica MDP0000319910 I 0.342
AT-HSFA6B Arabidopsis lyrata fgenesh2_kg.3__2495__AT3G22830.1 I 0.341
Bostr.19424s0375 Boechera stricta Bostr.19424s0375 I 0.341
HSFA6B Arabidopsis thaliana AT3G22830 D 0.340
Carubv10013808m.g Capsella rubella Carubv10013808m.g I 0.340
Bra023800 Brassica rapa Bra023800 I 0.339
cassava35362.valid.m1 Manihot esculenta cassava35362.valid.m1 I 0.339
cassava3334.m1 Manihot esculenta cassava3334.m1 I 0.337
MTR_1g102860 Medicago truncatula MTR_1g102860 I 0.336
Thhalv10020829m.g Eutrema salsugineum Thhalv10020829m.g I 0.336
Bo3g081420 Brassica oleracea Bo3g081420 I 0.335
GLYMA20G28870 Glycine max GLYMA20G28870 I 0.335
GLYMA10G38930 Glycine max GLYMA10G38930 I 0.334
Ca_07800 Cicer arietinum Ca_07800 I 0.334
29844.m003222 Ricinus communis 29844.m003222 I 0.334
evm.TU.supercontig_44.122 Carica papaya evm.TU.supercontig_44.122 I 0.334
Bra001885 Brassica rapa Bra001885 I 0.333
GLYMA10G00560 Glycine max GLYMA10G00560 I 0.332
Bo1g103760 Brassica oleracea Bo1g103760 I 0.331
Bo5g093470 Brassica oleracea Bo5g093470 I 0.331
Bra033913 Brassica rapa Bra033913 I 0.331
PGSC0003DMG400006447 Solanum tuberosum PGSC0003DMG400006447 I 0.329
Solyc09g082670.2 Solanum lycopersicum Solyc09g082670.2 I 0.329
GRMZM2G125969 Zea mays GRMZM2G125969 I 0.327
POPTR_0008s15740 Populus trichocarpa POPTR_0008s15740 I 0.326
SapurV1A.0006s1530 Salix purpurea SapurV1A.0006s1530 I 0.326
GSMUA_Achr8G20520_001 Musa acuminata GSMUA_Achr8G20520_001 I 0.325
POPTR_0010s09210 Populus trichocarpa POPTR_0010s09210 I 0.324
Solyc08g076590.2 Solanum lycopersicum Solyc08g076590.2 I 0.324
SapurV1A.0238s0150 Salix purpurea SapurV1A.0238s0150 I 0.324
SapurV1A.3703s0010 Salix purpurea SapurV1A.3703s0010 I 0.324
BRADI1G55630 Brachypodium distachyon BRADI1G55630 I 0.322
Ca_04554 Cicer arietinum Ca_04554 I 0.322
Cla021920 Citrullus lanatus Cla021920 I 0.322
Cucsa.254620 Cucumis sativus Cucsa.254620 I 0.322
Ciclev10006902m.g Citrus clementina Ciclev10006902m.g I 0.322
orange1.1g018107m.g Citrus sinensis orange1.1g018107m.g I 0.322
SapurV1A.0350s0180 Salix purpurea SapurV1A.0350s0180 I 0.322
chr5.CM0357.390.nc Lotus japonicus chr5.CM0357.390.nc I 0.322
AMTR_s00040p00209530 Amborella trichopoda AMTR_s00040p00209530 I 0.321
PRUPE_ppa010224mg Prunus persica PRUPE_ppa010224mg I 0.320
chr1.CM0322.130.nc Lotus japonicus chr1.CM0322.130.nc I 0.320
GLYMA10G03530 Glycine max GLYMA10G03530 I 0.319
MLOC_75519 Hordeum vulgare MLOC_75519 I 0.319
POPTR_0002s04900 Populus trichocarpa POPTR_0002s04900 I 0.319
Sb02g004370 Sorghum bicolor Sb02g004370 I 0.319
TCM_020700 Theobroma cacao TCM_020700 I 0.319
Gorai.007G139600 Gossypium raimondii Gorai.007G139600 I 0.319
Pavir.Ba03710 Panicum virgatum Pavir.Ba03710 I 0.319
Pavir.J18081 Panicum virgatum Pavir.J18081 I 0.319
chr5.CM0024.490.nc Lotus japonicus chr5.CM0024.490.nc I 0.319
GSMUA_Achr1G27200_001 Musa acuminata GSMUA_Achr1G27200_001 I 0.318
Si030256m.g Setaria italica Si030256m.g I 0.318
VIT_05s0020g04090 Vitis vinifera VIT_05s0020g04090 I 0.318