CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.94.63.1
(
Fragilariopsis cylindrus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
e_gw1.94.63.1
T242799_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.94.63.1
HSF
1
87
MLCNVESKNNGSIVSWLPDGNHFKVHDPRRFVEVVIPSAFKQKSLKSFQRQLHLYGFQRVHEGPDKGAYFHEKFLRNDRDLSLTISR
Links
Other
HSF
family TFs
Other
Fragilariopsis cylindrus
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phatr3_EG00322
Phaeodactylum tricornutum
Phatr3_EG00322
N
0.365
e_gw1.27.180.1
Fragilariopsis cylindrus
e_gw1.27.180.1
N
0.363
gw1.35.99.1
Fragilariopsis cylindrus
gw1.35.99.1
N
0.359
e_gw1.4.824.1
Fragilariopsis cylindrus
e_gw1.4.824.1
N
0.353
estExt_Genewise1.C_11901
Fragilariopsis cylindrus
estExt_Genewise1.C_11901
N
0.349
estExt_fgenesh2_kg.C_80112
Fragilariopsis cylindrus
estExt_fgenesh2_kg.C_80112
N
0.344
Phatr3_EG02471
Phaeodactylum tricornutum
Phatr3_EG02471
N
0.343
Phatr3_J43363
Phaeodactylum tricornutum
Phatr3_J43363
N
0.341
Phatr3_J49620
Phaeodactylum tricornutum
Phatr3_J49620
N
0.341
Thaps263978
Thalassiosira pseudonana
Thaps263978
N
0.341
gw1.26.222.1
Fragilariopsis cylindrus
gw1.26.222.1
N
0.339
estExt_Genewise1Plus.C_91152
Fragilariopsis cylindrus
estExt_Genewise1Plus.C_91152
I
0.338
gw1.27.181.1
Fragilariopsis cylindrus
gw1.27.181.1
N
0.336
Phatr3_J48572
Phaeodactylum tricornutum
Phatr3_J48572
N
0.335
gw1.1.2017.1
Fragilariopsis cylindrus
gw1.1.2017.1
N
0.333
gw1.22.133.1
Fragilariopsis cylindrus
gw1.22.133.1
N
0.329
estExt_fgenesh2_pg.C_40667
Fragilariopsis cylindrus
estExt_fgenesh2_pg.C_40667
N
0.327
Thaps22454
Thalassiosira pseudonana
Thaps22454
I
0.326
Phatr3_J48667
Phaeodactylum tricornutum
Phatr3_J48667
N
0.323
estExt_Genewise1Plus.C_130130
Fragilariopsis cylindrus
estExt_Genewise1Plus.C_130130
N
0.321
Lus10011185.g
Linum usitatissimum
Lus10011185.g
I
0.320