CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_5000161
(
Sporobolomyces roseus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
fgenesh1_pg.C_scaffold_5000161
T242858_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_5000161
HSF
530
682
FITKLRYMMLNPQEFGDVLGWSTDGQVVLVDFSLEDLTKDVLPRVFNHQNAGGFARQFTNYGFVQLKGEELRRALEYSPPPTGEEADEGEEAIDLDAHDLPPTTSTSPDEQLAPSNGSLDQEPEDEGGEGEEETQVPRDPQHWRAFKHVHSQA
Links
Other
HSF
family TFs
Other
Sporobolomyces roseus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.4884.1.1
Phytophthora capsici
e_gw1.4884.1.1
N
0.323