CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.4_#_16_#_3203_1_CCUX_EXTA
(
Fragilariopsis cylindrus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
fgenesh2_kg.4_#_16_#_3203_1_CCUX_EXTA
T242862_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.4_#_16_#_3203_1_CCUX_EXTA
HSF
1
91
MLENAEKEGYDHLIRWSSDGKSFKIQDSWNHKAIVEILKQNFNQTRFKSFLRQLQVYGFERSFKGQNQGECSHPMFIRGRKELLYKKSIEE
Links
Other
HSF
family TFs
Other
Fragilariopsis cylindrus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw1.30.101.1
Fragilariopsis cylindrus
gw1.30.101.1
N
0.407
fgenesh2_pg.26_#_250
Fragilariopsis cylindrus
fgenesh2_pg.26_#_250
N
0.400
fgenesh2_pg.4_#_65
Fragilariopsis cylindrus
fgenesh2_pg.4_#_65
N
0.391
e_gw1.7.780.1
Fragilariopsis cylindrus
e_gw1.7.780.1
N
0.336
gw1.1.2017.1
Fragilariopsis cylindrus
gw1.1.2017.1
N
0.335
gw1.8.695.1
Fragilariopsis cylindrus
gw1.8.695.1
N
0.329
gw1.90.39.1
Fragilariopsis cylindrus
gw1.90.39.1
N
0.326
gw1.6.996.1
Fragilariopsis cylindrus
gw1.6.996.1
N
0.324
Phatr3_J48667
Phaeodactylum tricornutum
Phatr3_J48667
N
0.323
e_gw1.12.279.1
Fragilariopsis cylindrus
e_gw1.12.279.1
N
0.323